RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 KLK14Q9P0G3 267 aa6.14□□□□□ -1.43
SMAD3-209ENST00000558894 USTQ9Y2C2 406 aa6.14□□□□□ -1.43
SMAD3-209ENST00000558894 PRG3Q9Y2Y8 225 aaPredicted RBP6.14□□□□□ -1.43
SMAD3-209ENST00000558894 FANCMQ8IYD8 2048 aa6.14□□□□□ -1.43
SMAD3-209ENST00000558894 ZDBF2Q9HCK1 2354 aa6.14□□□□□ -1.43
SMAD3-209ENST00000558894 VPS13AQ96RL7 3174 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 LRRIQ4A6NIV6 560 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 EIF5BO60841 1220 aaKnown RBP6.13□□□□□ -1.43
SMAD3-209ENST00000558894 KIF4AO95239 1232 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 C1RP00736 705 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 ASGR2P07307 311 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 SPATA31D3P0C874 917 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 PROZP22891 400 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 CDC25AP30304 524 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 MTHFRP42898 656 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 NAMPTP43490 491 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 OR1G1P47890 313 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 GLUD2P49448 558 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 MRE11P49959 708 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 HMGN5P82970 282 aaKnown RBP6.13□□□□□ -1.43
SMAD3-209ENST00000558894 GRIK3Q13003 919 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 SAFBQ15424 915 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMAD3-209ENST00000558894 XKR4Q5GH76 650 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 ATAT1Q5SQI0 421 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 CES5AQ6NT32 575 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 FUT10Q6P4F1 479 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 ALKAL1Q6UXT8 129 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 C15orf39Q6ZRI6 1047 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 SPATA31D4Q6ZUB0 917 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 C1orf186Q6ZWK4 172 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 PPFIBP1Q86W92 1011 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 GPR65Q8IYL9 337 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 KREMEN2Q8NCW0 462 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 LNX1Q8TBB1 728 aaPredicted RBP6.13□□□□□ -1.43
SMAD3-209ENST00000558894 PBXIP1Q96AQ6 731 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 MFSD14AQ96MC6 490 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 RIPOR3Q96MK2 946 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 CLSTN3Q9BQT9 956 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 APOL6Q9BWW8 343 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 BHMT2Q9H2M3 363 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 SFXN1Q9H9B4 322 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 SH2B1Q9NRF2 756 aaPredicted RBP6.13□□□□□ -1.43
SMAD3-209ENST00000558894 MRPL17Q9NRX2 175 aaKnown RBP6.13□□□□□ -1.43
SMAD3-209ENST00000558894 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 FNIP2Q9P278 1114 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 STK39Q9UEW8 545 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 LRWD1Q9UFC0 647 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 SORCS3Q9UPU3 1222 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 KIAA1024Q9UPX6 916 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 DCHS1Q96JQ0 3298 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 DENND4CQ5VZ89 1909 aa6.13□□□□□ -1.43
SMAD3-209ENST00000558894 CCDC195A0A1B0GUA6 201 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 C2CD2LO14523 706 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 ADAM12O43184 909 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 TGM5O43548 720 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 OBSL1O75147 1896 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 RFPL2O75678 378 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 KRT37O76014 449 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 RECQL4O94761 1208 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 PRKCBP05771 671 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 NPR3P17342 541 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 RPL17P18621 184 aaKnown RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 KLRC2P26717 231 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 AVPR2P30518 371 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 CCT6AP40227 531 aaKnown RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 PRPHP41219 470 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 NPTX2P47972 431 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 ATP2C1P98194 919 aaPredicted RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 SOX4Q06945 474 aaPredicted RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 TUSC3Q13454 348 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 PRPF4BQ13523 1007 aaKnown RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 HSP90AA2PQ14568 343 aaPredicted RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 MIA3Q5JRA6 1907 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 HYIQ5T013 277 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 RINT1Q6NUQ1 792 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 POTEHQ6S545 545 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 PRSS55Q6UWB4 352 aaPredicted RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 RSPO2Q6UXX9 243 aaPredicted RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 CABP7Q86V35 215 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 TMEM105Q8N8V8 129 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 CEP120Q8N960 986 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 C3orf58Q8NDZ4 430 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 HDAC7Q8WUI4 952 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 TMX3Q96JJ7 454 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 ZMAT2Q96NC0 199 aaKnown RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 FAM193BQ96PV7 902 aaPredicted RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 PPP1R10Q96QC0 940 aaKnown RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 NTPCRQ9BSD7 190 aaKnown RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 RUSC1Q9BVN2 902 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 COLEC11Q9BWP8 271 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 EMILIN2Q9BXX0 1053 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 HAPLN2Q9GZV7 340 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 NT5C3AQ9H0P0 336 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 C2orf40Q9H1Z8 148 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 WDR6Q9NNW5 1121 aaKnown RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 MAN1C1Q9NR34 630 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 DDX19AQ9NUU7 478 aaKnown RBP6.12□□□□□ -1.43
SMAD3-209ENST00000558894 ARHGAP28Q9P2N2 729 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 LIMD1Q9UGP4 676 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 ADAM28Q9UKQ2 775 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms