RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 DRC7Q8IY82 874 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.56□□□□□ -1.52
CASC4-206ENST00000558847 ZNF480Q8WV37 535 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 RIN2Q8WYP3 895 aaPredicted RBP5.56□□□□□ -1.52
CASC4-206ENST00000558847 NKD2Q969F2 451 aaPredicted RBP5.56□□□□□ -1.52
CASC4-206ENST00000558847 SOX7Q9BT81 388 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 MEGF9Q9H1U4 602 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 C14orf93Q9H972 538 aaKnown RBP5.56□□□□□ -1.52
CASC4-206ENST00000558847 DDX20Q9UHI6 824 aaKnown RBP5.56□□□□□ -1.52
CASC4-206ENST00000558847 DNAI1Q9UI46 699 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 LIMCH1Q9UPQ0 1083 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 STXBP5LQ9Y2K9 1186 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 RIPOR2Q9Y4F9 1068 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 SLC4A7Q9Y6M7 1214 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 CAPN8A6NHC0 703 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 TPP1O14773 563 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 NRP1O14786 923 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 B3GALT2O43825 422 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 AKR1B10O60218 316 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 PRAMEF4O60810 478 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 UBXN7O94888 489 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 GAAP10253 952 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 EDNRBP24530 442 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 CTSSP25774 331 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 KCNQ1P51787 676 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 HMGA2P52926 109 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 ANTXR2P58335 489 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 GPSM2P81274 684 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 CDC42EP1Q00587 391 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 RAB39AQ14964 217 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 ANO6Q4KMQ2 910 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 CCDC157Q569K6 752 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 CCDC149Q6ZUS6 474 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 TAS1R1Q7RTX1 841 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 OVCH2Q7RTZ1 564 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 SNX33Q8WV41 574 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 RGMAQ96B86 450 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 MPHOSPH6Q99547 160 aaKnown RBP5.55□□□□□ -1.52
CASC4-206ENST00000558847 SSBP3Q9BWW4 388 aaPredicted RBP5.55□□□□□ -1.52
CASC4-206ENST00000558847 CARD11Q9BXL7 1154 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 KIAA1683Q9H0B3 1180 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 DEF6Q9H4E7 631 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 TDP1Q9NUW8 608 aa5.55□□□□□ -1.52
CASC4-206ENST00000558847 GOLIM4O00461 696 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 MTSS1O43312 755 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 TMEM127O75204 238 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 FTLP02792 175 aaPredicted RBP5.54□□□□□ -1.52
CASC4-206ENST00000558847 TACR2P21452 398 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 HTR1BP28222 390 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 CRHR1P34998 444 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 USP14P54578 494 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 PER3P56645 1201 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 CD69Q07108 199 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 PPP3CAQ08209 521 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 MST1LQ2TV78 715 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 C3orf36Q3SXR2 165 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 ZMAT1Q5H9K5 638 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 CYB5RLQ6IPT4 315 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 ZNF585AQ6P3V2 769 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 ARHGEF18Q6ZSZ5 1173 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 CIR1Q86X95 450 aaPredicted RBP5.54□□□□□ -1.52
CASC4-206ENST00000558847 PALM2Q8IXS6 379 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 SMC5Q8IY18 1101 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 C3orf20Q8ND61 904 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 NSUN6Q8TEA1 469 aaKnown RBP5.54□□□□□ -1.52
CASC4-206ENST00000558847 GCDHQ92947 438 aaPredicted RBP5.54□□□□□ -1.52
CASC4-206ENST00000558847 SORCS2Q96PQ0 1159 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 CDK5RAP1Q96SZ6 601 aaKnown RBP5.54□□□□□ -1.52
CASC4-206ENST00000558847 PTPN18Q99952 460 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 SCAND2PQ9GZW5 306 aaPredicted RBP5.54□□□□□ -1.52
CASC4-206ENST00000558847 BCO1Q9HAY6 547 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 DMRT3Q9NQL9 472 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 PPP4R1LQ9P1A2 415 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 CALCOCO1Q9P1Z2 691 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 CDC42EP3Q9UKI2 254 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 ZDHHC9Q9Y397 364 aa5.54□□□□□ -1.52
CASC4-206ENST00000558847 MGEA5O60502 916 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 GYPEP15421 78 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 RPL17P18621 184 aaKnown RBP5.53□□□□□ -1.52
CASC4-206ENST00000558847 STAT5BP51692 787 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 AGFG1P52594 562 aaKnown RBP5.53□□□□□ -1.52
CASC4-206ENST00000558847 RRADP55042 308 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 MORC3Q14149 939 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 SAFB2Q14151 953 aaKnown RBP eCLIP5.53□□□□□ -1.52
CASC4-206ENST00000558847 ICAM4Q14773 271 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 TBR1Q16650 682 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 ATP2B3Q16720 1220 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 KIAA0753Q2KHM9 967 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 ZNF568Q3ZCX4 644 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 AGBL4Q5VU57 503 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 USP51Q70EK9 711 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 PDZD4Q76G19 769 aaPredicted RBP5.53□□□□□ -1.52
CASC4-206ENST00000558847 CLEC14AQ86T13 490 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 RSPH3Q86UC2 560 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 RHOT1Q8IXI2 618 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 EXOC8Q8IYI6 725 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 KIAA0319LQ8IZA0 1049 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 SLC7A6OSQ96CW6 309 aaPredicted RBP5.53□□□□□ -1.52
CASC4-206ENST00000558847 TNIP3Q96KP6 325 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms