RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CLIC6Q96NY7 704 aa13.77□□□□□ -0.21
SMAD3-208ENST00000558827 TCHPQ9BT92 498 aa13.77□□□□□ -0.21
SMAD3-208ENST00000558827 LRFN3Q9BTN0 628 aa13.77□□□□□ -0.21
SMAD3-208ENST00000558827 ZHX3Q9H4I2 956 aa13.77□□□□□ -0.21
SMAD3-208ENST00000558827 PRKAG3Q9UGI9 489 aa13.77□□□□□ -0.21
SMAD3-208ENST00000558827 PI4K2BG5E9Z4 385 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 INPPL1O15357 1258 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 NR1I2O75469 434 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 SOD2P04179 222 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 URODP06132 367 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 PLCG1P19174 1290 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 EFNA5P52803 228 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 GRIK3Q13003 919 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 FOXD4L6Q3SYB3 417 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-208ENST00000558827 HYIQ5T013 277 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 KIAA1841Q6NSI8 718 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 FOXD4L3Q6VB84 417 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-208ENST00000558827 TMEM184AQ6ZMB5 413 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 PALB2Q86YC2 1186 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 TMEM130Q8N3G9 435 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 CALML4Q96GE6 196 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 EPSTI1Q96J88 318 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 DRC1Q96MC2 740 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 ACO2Q99798 780 aaKnown RBP13.76□□□□□ -0.21
SMAD3-208ENST00000558827 HERC2P3Q9BVR0 1158 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 PHF7Q9BWX1 381 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-208ENST00000558827 PANK2Q9BZ23 570 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 CDT1Q9H211 546 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 GOLGA2P5Q9HBQ8 144 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 C11orf16Q9NQ32 467 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
SMAD3-208ENST00000558827 MTMR6Q9Y217 621 aa13.76□□□□□ -0.21
SMAD3-208ENST00000558827 DCXO43602 365 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 LILRB3O75022 631 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 THP07101 528 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 PDCP20941 246 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 CBX2Q14781 532 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-208ENST00000558827 PTPAQ15257 358 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 TMEM31Q5JXX7 168 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 FUT10Q6P4F1 479 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 PRSS55Q6UWB4 352 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-208ENST00000558827 CEP57Q86XR8 500 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 RIN2Q8WYP3 895 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-208ENST00000558827 RSPH1Q8WYR4 309 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 SUSD6Q92537 303 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 C1QTNF1Q9BXJ1 281 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 EMILIN2Q9BXX0 1053 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 MRPL4Q9BYD3 311 aaKnown RBP13.75□□□□□ -0.21
SMAD3-208ENST00000558827 NT5C3AQ9H0P0 336 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 ARHGAP28Q9P2N2 729 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 MYO10Q9HD67 2058 aa13.75□□□□□ -0.21
SMAD3-208ENST00000558827 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 I3L4J1 428 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 TEX28O15482 410 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 KIF4AO95239 1232 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 KRT18P05783 430 aaKnown RBP13.74□□□□□ -0.21
SMAD3-208ENST00000558827 PLS3P13797 630 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 GUCY2CP25092 1073 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 MATR3P43243 847 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMAD3-208ENST00000558827 GLUD2P49448 558 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 TUSC3Q13454 348 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 HSP90AA2PQ14568 343 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-208ENST00000558827 DCAF4L1Q3SXM0 396 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 KIAA0319Q5VV43 1072 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 CES5AQ6NT32 575 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 MYCT1Q8N699 235 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 TMEM161BQ8NDZ6 487 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 FBXL18Q96ME1 805 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 USP28Q96RU2 1077 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 POP1Q99575 1024 aaKnown RBP13.74□□□□□ -0.21
SMAD3-208ENST00000558827 REEP2Q9BRK0 252 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 POMKQ9H5K3 350 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 ANKFY1Q9P2R3 1169 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 TFIP11Q9UBB9 837 aaKnown RBP13.74□□□□□ -0.21
SMAD3-208ENST00000558827 ADAM28Q9UKQ2 775 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 TNFSF13BQ9Y275 285 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 IRAK3Q9Y616 596 aa13.74□□□□□ -0.21
SMAD3-208ENST00000558827 LOC730098B7Z3J9 87 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-208ENST00000558827 FAM13AO94988 1023 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 ALADP13716 330 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 HOXB8P17481 243 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-208ENST00000558827 LONP1P36776 959 aaKnown RBP13.73□□□□□ -0.21
SMAD3-208ENST00000558827 CLCN4P51793 760 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 SPAG1Q07617 926 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 STRN3Q13033 797 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 GIT2Q14161 759 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 RTP2Q5QGT7 225 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 FAM171A1Q5VUB5 890 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 DYMQ7RTS9 669 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 RAD54LQ92698 747 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 BICD1Q96G01 975 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 AK8Q96MA6 479 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 CCDC94Q9BW85 323 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-208ENST00000558827 ADAM7Q9H2U9 754 aa13.73□□□□□ -0.21
SMAD3-208ENST00000558827 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms