RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 GSPT2Q8IYD1 628 aaKnown RBP11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 MRPL4Q9BYD3 311 aaKnown RBP11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 SETD4Q9NVD3 440 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 PCDHB4Q9Y5E5 795 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 H3BRB1 525 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 SOCS7O14512 581 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 HLA-DRAP01903 254 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 RFC5P40937 340 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 CDK17Q00537 523 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 PPFIA1Q13136 1202 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 KIZQ2M2Z5 673 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 TMEM270Q6UE05 265 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 ZC3H3Q8IXZ2 948 aaKnown RBP11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 CEP89Q96ST8 783 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 ARHGAP28Q9P2N2 729 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 ERLIN2O94905 339 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 FTLP02792 175 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 MYL3P08590 195 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 WNT7BP56706 349 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 BEX3Q00994 111 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 MESDQ14696 234 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 RPS6KA1Q15418 735 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 CCL14Q16627 93 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 WHAMMP3Q1A5X7 153 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 CST9Q5W186 159 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 SLC9A9Q8IVB4 645 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 TMEM130Q8N3G9 435 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 TCP11Q8WWU5 503 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 MTMR12Q9C0I1 747 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 TMEM8AQ9HCN3 771 aa11.65□□□□□ -0.54
CSPG4P5-201ENST00000558731 EXTL3O43909 919 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 ADCY3O60266 1144 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 TMOD1P28289 359 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 CKAP4Q07065 602 aaKnown RBP11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 TFDP1Q14186 410 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 OR5B17Q8NGF7 314 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 VTI1AQ96AJ9 217 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 OSBPL9Q96SU4 736 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 THAP2Q9H0W7 228 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 CEP350Q5VT06 3117 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 HBP1O60381 514 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 EDN1P05305 212 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 CD19P15391 556 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 TNFAIP2Q03169 654 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 ORC1Q13415 861 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 ACVR2BQ13705 512 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 IER5Q5VY09 327 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 SLFN12LQ6IEE8 588 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 NPLOC4Q8TAT6 608 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 LNX1Q8TBB1 728 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 TINF2Q9BSI4 451 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 STRA6Q9BX79 667 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 GTPBP10A4D1E9 387 aaKnown RBP11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 IGF2BP3O00425 579 aaKnown RBP eCLIP11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 MAFO75444 373 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 MMEP08473 750 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 LMAN1P49257 510 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 SYN2Q92777 582 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 AGPAT1Q99943 283 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 TSPYL1Q9H0U9 437 aa11.64□□□□□ -0.55
CSPG4P5-201ENST00000558731 NAB2Q15742 525 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 EEF1DP3Q658K8 133 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 ZNF653Q96CK0 615 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 ARFGAP3Q9NP61 516 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 MXD4Q14582 209 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 C1orf220Q5T0J3 134 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 ATF7IP2Q5U623 682 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 MAML3Q96JK9 1138 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 BTBD6Q96KE9 485 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 KREMEN1Q96MU8 473 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 AP1M1Q9BXS5 423 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 RSPH14Q9UHP6 348 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 KCNG1Q9UIX4 513 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 SNX12Q9UMY4 172 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 DNAJC25-GNG10A0A024R161 153 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 PDE2AO00408 941 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 ATG7O95352 703 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 TBC1D8O95759 1140 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 SMPD1P17405 629 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 ARL2P36404 184 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 ZNF211Q13398 564 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 IFI16Q16666 785 aaKnown RBP11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 IFT81Q8WYA0 676 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 TRIM6Q9C030 488 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 MINDY3Q9H8M7 445 aa11.63□□□□□ -0.55
CSPG4P5-201ENST00000558731 SPOPO43791 374 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 STRNO43815 780 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 WEE2P0C1S8 567 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 C6orf222P0C671 652 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 CXCL8P10145 99 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 GARTP22102 1010 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 ARHGAP1Q07960 439 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 NCOA4Q13772 614 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 ASTE1Q2TB18 679 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 CCDC62Q6P9F0 684 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 TRAPPC11Q7Z392 1133 aa11.62□□□□□ -0.55
CSPG4P5-201ENST00000558731 SESTD1Q86VW0 696 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms