RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 B4GALT3O60512 393 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 CLASP2O75122 1294 aaKnown RBP8.93□□□□□ -0.98
TRAF3-205ENST00000558700 NR1I2O75469 434 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 CXCL14O95715 111 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 XRCC6P12956 609 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRAF3-205ENST00000558700 ATP2B1P20020 1258 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 GLRA2P23416 452 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 HOXA11P31270 313 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-205ENST00000558700 MTHFRP42898 656 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 TRAPPC10P48553 1259 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 GUCY1B3Q02153 619 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 ELOAQ14241 798 aaKnown RBP8.93□□□□□ -0.98
TRAF3-205ENST00000558700 PTPN14Q15678 1187 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 PTPN21Q16825 1174 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 KIAA1841Q6NSI8 718 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 ELMSAN1Q6PJG2 1045 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 HFE2Q6ZVN8 426 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 ZBTB33Q86T24 672 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 ZBTB8OSQ8IWT0 167 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 FAM184AQ8NB25 1140 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 SMG8Q8ND04 991 aaKnown RBP8.93□□□□□ -0.98
TRAF3-205ENST00000558700 PIGOQ8TEQ8 1089 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 CPB2Q96IY4 423 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 HERC2P3Q9BVR0 1158 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 EMILIN2Q9BXX0 1053 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 TMEM60Q9H2L4 133 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 ADAM7Q9H2U9 754 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 FOXP1Q9H334 677 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-205ENST00000558700 DBR1Q9UK59 544 aaKnown RBP8.93□□□□□ -0.98
TRAF3-205ENST00000558700 SLC27A5Q9Y2P5 690 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 KIF3AQ9Y496 699 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 C5orf42Q9H799 3197 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 PLXNA3P51805 1871 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 ARHGEF35A5YM69 484 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 TMEM221A6NGB7 291 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 M0R296 226 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 ACTN4O43707 911 aaKnown RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 POMCP01189 267 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 FBXO45P0C2W1 286 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 ARF4P18085 180 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 MUTP22033 750 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 SP100P23497 879 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 ARL2P36404 184 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 OR1G1P47890 313 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 ZXDAP98168 799 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 SIGLEC14Q08ET2 396 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 GRIK3Q13003 919 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 TTC38Q5R3I4 469 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 RARS2Q5T160 578 aaKnown RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 SLC27A1Q6PCB7 646 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 POTEGQ6S5H5 508 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 TRIM67Q6ZTA4 783 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 CABP7Q86V35 215 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 ZNF280BQ86YH2 543 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 NOSTRINQ8IVI9 506 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 SUGP1Q8IWZ8 645 aaKnown RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 TDRD5Q8NAT2 981 aaKnown RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 AUTS2Q8WXX7 1259 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 PRIMPOLQ96LW4 560 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 NACC1Q96RE7 527 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 RPS6KC1Q96S38 1066 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 GAD1Q99259 594 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 POLR3CQ9BUI4 534 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 APOL6Q9BWW8 343 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 VN1R3Q9BXE9 311 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 EIF2AQ9BY44 585 aaKnown RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 RAB34Q9BZG1 259 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 C2orf40Q9H1Z8 148 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 NXF3Q9H4D5 531 aaKnown RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 POMKQ9H5K3 350 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 SFXN1Q9H9B4 322 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 MRPL17Q9NRX2 175 aaKnown RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 PRMT7Q9NVM4 692 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 FKBPLQ9UIM3 349 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 VPS9D1Q9Y2B5 631 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 SSX2IPQ9Y2D8 614 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 FAN1Q9Y2M0 1017 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 GIT1Q9Y2X7 761 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 PRG3Q9Y2Y8 225 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-205ENST00000558700 C2orf16Q68DN1 1984 aa8.92□□□□□ -0.98
TRAF3-205ENST00000558700 ARL5CA6NH57 179 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 NRP1O14786 923 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 N4BP3O15049 544 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 B4GALT5O43286 388 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 MED24O75448 989 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 DDHD2O94830 711 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 NPTXRO95502 500 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 SOD2P04179 222 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 ALDH2P05091 517 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 SSBP05455 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
TRAF3-205ENST00000558700 ADH1AP07327 375 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 SPATA31C1P0DKV0 1188 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 EPCAMP16422 314 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 RPA1P27694 616 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 NAMPTP43490 491 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 GLUD2P49448 558 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 SCNN1GP51170 649 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 DSC1Q08554 894 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 PPP2R5AQ15172 486 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 CDCA2Q69YH5 1023 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms