RNA–Protein interactions for RNA: ENST00000558659.5

CCDC33-205, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-205ENST00000558659 RAG1P15918 1043 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 CDK11BP21127 795 aaKnown RBP13.64□□□□□ -0.23
CCDC33-205ENST00000558659 PPP1R2P41236 205 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 KCNJ12Q14500 433 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 SNRNP35Q16560 246 aaKnown RBP13.64□□□□□ -0.23
CCDC33-205ENST00000558659 CT47A1Q5JQC4 288 aaPredicted RBP13.64□□□□□ -0.23
CCDC33-205ENST00000558659 NOTUMQ6P988 496 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 CCDC127Q96BQ5 260 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 TAB2Q9NYJ8 693 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 KLK14Q9P0G3 267 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 SMTNL1A8MU46 457 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 GOLGA6L19H0YKK7 550 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 KIAA0355O15063 1070 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 CAND2O75155 1236 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 STAG3L1P0CL83 205 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 CXCL8P10145 99 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 GARTP22102 1010 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 EPHB4P54760 987 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 DSC3Q14574 896 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 KRT31Q15323 416 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 ENOX2Q16206 610 aaKnown RBP13.64□□□□□ -0.23
CCDC33-205ENST00000558659 PLEKHG4Q58EX7 1191 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 TCP11X2Q5H9J9 407 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 C16orf59Q7L2K0 433 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 SLC9A9Q8IVB4 645 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 RNF169Q8NCN4 708 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 DPF3Q92784 378 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 BADQ92934 168 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 VPS16Q9H269 839 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 PDE11AQ9HCR9 933 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 PTPRJQ12913 1337 aa13.64□□□□□ -0.23
CCDC33-205ENST00000558659 C1orf220Q5T0J3 134 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 C12orf56Q8IXR9 622 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 FAM186BQ8IYM0 893 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 GPD1LQ8N335 351 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 SECISBP2LQ93073 1101 aaKnown RBP13.63□□□□□ -0.23
CCDC33-205ENST00000558659 FBXL18Q96ME1 805 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 IPPQ9Y573 584 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 PCDHB2Q9Y5E7 798 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 OGTO15294 1046 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 EXTL3O43909 919 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 EVI5O60447 810 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 CAVIN2O95810 425 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 ATF7P17544 494 aaPredicted RBP13.63□□□□□ -0.23
CCDC33-205ENST00000558659 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 SLFN12LQ6IEE8 588 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 GOLGA5Q8TBA6 731 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 ZFP42Q96MM3 310 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 THAP9Q9H5L6 903 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC33-205ENST00000558659 CHD7Q9P2D1 2997 aa13.63□□□□□ -0.23
CCDC33-205ENST00000558659 CPSF3Q9UKF6 684 aaKnown RBP13.63□□□□□ -0.23
CCDC33-205ENST00000558659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 TEX33O43247 280 aa13.62□□□□□ -0.23
CCDC33-205ENST00000558659 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 DLATP10515 647 aaKnown RBP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 RPL13P26373 211 aaKnown RBP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 PSMC2P35998 433 aaKnown RBP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 NCBP1Q09161 790 aaKnown RBP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 NFIL3Q16649 462 aa13.62□□□□□ -0.23
CCDC33-205ENST00000558659 SLC10A6Q3KNW5 377 aa13.62□□□□□ -0.23
CCDC33-205ENST00000558659 DCAF17Q5H9S7 520 aaPredicted RBP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 GLRA4Q5JXX5 417 aa13.62□□□□□ -0.23
CCDC33-205ENST00000558659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 TRIM6Q9C030 488 aaPredicted RBP13.62□□□□□ -0.23
CCDC33-205ENST00000558659 FAM105AQ9NUU6 356 aa13.62□□□□□ -0.23
CCDC33-205ENST00000558659 INTS13Q9NVM9 706 aa13.62□□□□□ -0.23
CCDC33-205ENST00000558659 CACNG4Q9UBN1 327 aa13.62□□□□□ -0.23
CCDC33-205ENST00000558659 FRMD4BQ9Y2L6 1034 aa13.62□□□□□ -0.23
CCDC33-205ENST00000558659 ENPP3O14638 875 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 N4BP3O15049 544 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 CXCL10P02778 98 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 MCF2P10911 925 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 ABCD1P33897 745 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 FANCCQ00597 558 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 PPP3CAQ08209 521 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 MIIPQ5JXC2 388 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 TCERG1LQ5VWI1 586 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 MFSD5Q6N075 450 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 ZNF710Q8N1W2 664 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 ZNF516Q92618 1163 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 CEP63Q96MT8 703 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 ZMAT2Q96NC0 199 aaKnown RBP13.61□□□□□ -0.23
CCDC33-205ENST00000558659 ADPGKQ9BRR6 497 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 TUBGCP2Q9BSJ2 902 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 RBAKQ9NYW8 714 aaPredicted RBP13.61□□□□□ -0.23
CCDC33-205ENST00000558659 PLAGL2Q9UPG8 496 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 ZNF233A6NK53 670 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 LRRIQ3A6PVS8 624 aaPredicted RBP13.61□□□□□ -0.23
CCDC33-205ENST00000558659 LACTBL1A8MY62 500 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 RECQL4O94761 1208 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 SCP2P22307 547 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 AXLP30530 894 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 MTIF2P46199 727 aaKnown RBP13.61□□□□□ -0.23
CCDC33-205ENST00000558659 GATMP50440 423 aa13.61□□□□□ -0.23
CCDC33-205ENST00000558659 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms