RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 PYGMP11217 842 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 COPB2P35606 906 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 FXR1P51114 621 aaKnown RBP eCLIP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 TSGA10IPQ3SY00 556 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 SHC4Q6S5L8 630 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 FBXO11Q86XK2 927 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 MS4A14Q96JA4 679 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 MAGED4Q96JG8 741 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 GINS4Q9BRT9 223 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 COPG2Q9UBF2 871 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 TTC7AQ9ULT0 858 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 SASH1O94885 1247 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 NAALADL2Q58DX5 795 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 RSBN1Q5VWQ0 802 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRIM72Q6ZMU5 477 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 TMEM35BQ8NCS4 154 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 ANKRD36BP1Q96IX9 119 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRIM51Q9BSJ1 452 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 NBNO60934 754 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 RHOBTB1O94844 696 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 BCL10O95999 233 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 VIL1P09327 827 aaKnown RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 TTKP33981 857 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 SOX6P35712 828 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 DMC1Q14565 340 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 MCRS1Q96EZ8 462 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 RWDD3Q9Y3V2 267 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 GMEB1Q9Y692 573 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 NCOA3Q9Y6Q9 1424 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 PCDH11YQ9BZA8 1340 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 FTLP02792 175 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 CDC25AP30304 524 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 PLOD1Q02809 727 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 LVRNQ6Q4G3 990 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 MDM1Q8TC05 714 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 C17orf50Q8WW18 174 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 ADPGKQ9BRR6 497 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 MED10Q9BTT4 135 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 NACA2Q9H009 215 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 A1CFQ9NQ94 594 aaKnown RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 CDV3Q9UKY7 258 aaKnown RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 ARHGEF37A1IGU5 675 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRIM24O15164 1050 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 PPARGP37231 505 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 ELF3P78545 371 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 PDAP1Q13442 181 aaKnown RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 NAB2Q15742 525 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 CDH24Q86UP0 819 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 ATXN2LQ8WWM7 1075 aaKnown RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 UNC45AQ9H3U1 944 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 DCDC2Q9UHG0 476 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 KANSL1LA0AUZ9 987 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 SPDYE16A6NNV3 312 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 USP1O94782 785 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 KRT6AP02538 564 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 KRT6BP04259 564 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 KRT6CP48668 564 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 POLGP54098 1239 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 SLC29A2Q14542 456 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 GSTA3Q16772 222 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 NSMFQ6X4W1 530 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZCCHC7Q8N3Z6 543 aaKnown RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 SUPT20HQ8NEM7 779 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 C19orf60Q96EN9 201 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 CNPY3Q9BT09 278 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 CCDC28BQ9BUN5 200 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 MMADHCQ9H3L0 296 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 C20orf96Q9NUD7 363 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 ASNSD1Q9NWL6 643 aa12.4□□□□□ -0.42
CSPG4P12-201ENST00000558282 M0R2C6 588 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 CLASP2O75122 1294 aaKnown RBP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ATP6V1E1P36543 226 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 IL12RB1P42701 662 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ARSEP51690 589 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 MDH1BQ5I0G3 518 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 FBXO31Q5XUX0 539 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 POLD4Q9HCU8 107 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 UVRAGQ9P2Y5 699 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ATXN2Q99700 1313 aaKnown RBP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 MAP2K7O14733 419 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 NR3C1P04150 777 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 RFC5P40937 340 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 TAP1Q03518 808 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ENOSF1Q7L5Y1 443 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 CDKL3Q8IVW4 592 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 C4orf33Q8N1A6 199 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms