RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 CTNND2Q9UQB3 1225 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 INPP5FQ9Y2H2 1132 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 DGKIO75912 1065 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 CLTAP09496 248 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 GATMP50440 423 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 CLLU1OSQ5K130 101 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 FAM109BQ6ICB4 259 aaPredicted RBP23.18■■□□□ 1.3
CASC4-204ENST00000557945 CENPPQ6IPU0 288 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 HELQQ8TDG4 1101 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 DACH1Q9UI36 760 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 TRAF3IP3Q9Y228 551 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 GIT1Q9Y2X7 761 aa23.18■■□□□ 1.3
CASC4-204ENST00000557945 TBKBP1A7MCY6 615 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 KIAA0391O15091 583 aaKnown RBP23.17■■□□□ 1.3
CASC4-204ENST00000557945 TLL1O43897 1013 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 LDHAP00338 332 aaKnown RBP23.17■■□□□ 1.3
CASC4-204ENST00000557945 NR3C1P04150 777 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 CCNE1P24864 410 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 MLH1P40692 756 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 TNFSF9P41273 254 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 RABGGTBP53611 331 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 PAK1Q13153 545 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 PAN2Q504Q3 1202 aaKnown RBP23.17■■□□□ 1.3
CASC4-204ENST00000557945 C12orf56Q8IXR9 622 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 ZSWIM2Q8NEG5 633 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 GAD1Q99259 594 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 RPF1Q9H9Y2 349 aaKnown RBP23.17■■□□□ 1.3
CASC4-204ENST00000557945 TOPORSQ9NS56 1045 aaPredicted RBP23.17■■□□□ 1.3
CASC4-204ENST00000557945 RNF19AQ9NV58 838 aa23.17■■□□□ 1.3
CASC4-204ENST00000557945 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.16■■□□□ 1.3
CASC4-204ENST00000557945 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.16■■□□□ 1.3
CASC4-204ENST00000557945 TRIM49BA6NDI0 452 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 EXTL3O43909 919 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 FAM189A1O60320 539 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 EXOC3O60645 756 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 OFD1O75665 1012 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 PMS1P54277 932 aaKnown RBP23.16■■□□□ 1.3
CASC4-204ENST00000557945 STX17P56962 302 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 STX1AQ16623 288 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 ANKRD40Q6AI12 368 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 GPD1LQ8N335 351 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 XXYLT1Q8NBI6 393 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 RPS6KC1Q96S38 1066 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 TMEM117Q9H0C3 514 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 ANO10Q9NW15 660 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 CPSF3Q9UKF6 684 aaKnown RBP23.16■■□□□ 1.3
CASC4-204ENST00000557945 INSL6Q9Y581 213 aa23.16■■□□□ 1.3
CASC4-204ENST00000557945 PTPRSQ13332 1948 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 BICDL2A1A5D9 508 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 SYCE3A1L190 88 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 ARL5CA6NH57 179 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 CXCL8P10145 99 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 NR2F2P24468 414 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 RPL13P26373 211 aaKnown RBP23.15■■□□□ 1.3
CASC4-204ENST00000557945 LRRC63Q05C16 580 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 TYRO3Q06418 890 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 ZCWPW2Q504Y3 356 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 NOMO2Q5JPE7 1267 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 RDH13Q8NBN7 331 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 URGCPQ8TCY9 931 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 FAM212AQ96EL1 285 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 ZFP42Q96MM3 310 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 RAD9AQ99638 391 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 KIAA1586Q9HCI6 787 aa23.15■■□□□ 1.3
CASC4-204ENST00000557945 A0A1W2PPC1 479 aa23.14■■□□□ 1.3
CASC4-204ENST00000557945 ENOX2Q16206 610 aaKnown RBP23.14■■□□□ 1.3
CASC4-204ENST00000557945 EDRF1Q3B7T1 1238 aa23.14■■□□□ 1.3
CASC4-204ENST00000557945 ZSCAN23Q3MJ62 389 aa23.14■■□□□ 1.3
CASC4-204ENST00000557945 CEP135Q66GS9 1140 aa23.14■■□□□ 1.3
CASC4-204ENST00000557945 CRELD2Q6UXH1 353 aaPredicted RBP23.14■■□□□ 1.3
CASC4-204ENST00000557945 SLC9A9Q8IVB4 645 aa23.14■■□□□ 1.3
CASC4-204ENST00000557945 CASD1Q96PB1 797 aa23.14■■□□□ 1.3
CASC4-204ENST00000557945 DMAC2Q9NW81 257 aa23.14■■□□□ 1.3
CASC4-204ENST00000557945 ZNF233A6NK53 670 aa23.14■■□□□ 1.29
CASC4-204ENST00000557945 AFF1P51825 1210 aaKnown RBP23.14■■□□□ 1.29
CASC4-204ENST00000557945 HTRA4P83105 476 aaPredicted RBP23.14■■□□□ 1.29
CASC4-204ENST00000557945 ADAM9Q13443 819 aa23.14■■□□□ 1.29
CASC4-204ENST00000557945 BTG3Q14201 252 aaPredicted RBP23.14■■□□□ 1.29
CASC4-204ENST00000557945 MYBPC2Q14324 1141 aa23.14■■□□□ 1.29
CASC4-204ENST00000557945 HSP90AA2PQ14568 343 aaPredicted RBP23.14■■□□□ 1.29
CASC4-204ENST00000557945 NFIL3Q16649 462 aa23.14■■□□□ 1.29
CASC4-204ENST00000557945 SLC10A6Q3KNW5 377 aa23.14■■□□□ 1.29
CASC4-204ENST00000557945 CBWD2Q8IUF1 395 aa23.14■■□□□ 1.29
CASC4-204ENST00000557945 ZNF689Q96CS4 500 aaPredicted RBP23.14■■□□□ 1.29
CASC4-204ENST00000557945 SNX27Q96L92 541 aa23.14■■□□□ 1.29
CASC4-204ENST00000557945 RBAKQ9NYW8 714 aaPredicted RBP23.14■■□□□ 1.29
CASC4-204ENST00000557945 FRMD4BQ9Y2L6 1034 aa23.14■■□□□ 1.29
CASC4-204ENST00000557945 POMCP01189 267 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 CCDC192P0DO97 292 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 MYOGP15173 224 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 SCNN1GP51170 649 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 PPP2R3AQ06190 1150 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 SNRNP35Q16560 246 aaKnown RBP23.13■■□□□ 1.29
CASC4-204ENST00000557945 TTI2Q6NXR4 508 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 EEF2KMTQ96G04 330 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 GZF1Q9H116 711 aaPredicted RBP23.13■■□□□ 1.29
CASC4-204ENST00000557945 CXCL16Q9H2A7 254 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 PLEKHA5Q9HAU0 1116 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 RWDD2AQ9UIY3 292 aa23.13■■□□□ 1.29
CASC4-204ENST00000557945 LACTBL1A8MY62 500 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms