RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 BRD9Q9H8M2 597 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 SEMA3GQ9NS98 782 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 UCKL1Q9NWZ5 548 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 GGA3Q9NZ52 723 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 KIF17Q9P2E2 1029 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 FTSJ1Q9UET6 329 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 MKL2Q9ULH7 1088 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 WASF3Q9UPY6 502 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 TMX2Q9Y320 296 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 PAXBP1Q9Y5B6 917 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 A0A0A6YYJ9 748 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 TCRBV5S2A0A599 114 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 PODXLO00592 558 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 ARHGAP6O43182 974 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 HOXC11O43248 304 aaPredicted RBP4.39□□□□□ -1.71
TDP1-217ENST00000557782 PHF2O75151 1096 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 GFPT2O94808 682 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 TBX18O95935 607 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 ESR1P03372 595 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 RPN1P04843 607 aaKnown RBP4.39□□□□□ -1.71
TDP1-217ENST00000557782 FTH1P19P0C7X4 201 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 SPATA31C1P0DKV0 1188 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 MYL4P12829 197 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 FAHP16930 419 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 PTGS1P23219 599 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 TACR1P25103 407 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 MC4RP32245 332 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 ADMP35318 185 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 LIFRP42702 1097 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 RAD52P43351 418 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 CREMQ03060 361 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 TLE2Q04725 743 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 DBPQ10586 325 aaPredicted RBP4.39□□□□□ -1.71
TDP1-217ENST00000557782 TRPC3Q13507 836 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 NOLC1Q14978 699 aaKnown RBP eCLIP4.39□□□□□ -1.71
TDP1-217ENST00000557782 ALDH1L2Q3SY69 923 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 SLC44A4Q53GD3 710 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 CCDC30Q5VVM6 783 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 JMJD6Q6NYC1 403 aaPredicted RBP4.39□□□□□ -1.71
TDP1-217ENST00000557782 CNKSR3Q6P9H4 555 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 LINC00114Q6XXX2 140 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 SPOCD1Q6ZMY3 1216 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 NETO2Q8NC67 525 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 GPR156Q8NFN8 814 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 OR6B3Q8NGW1 331 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.39□□□□□ -1.71
TDP1-217ENST00000557782 CYP2W1Q8TAV3 490 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 FAM71BQ8TC56 605 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 CENPIQ92674 756 aaPredicted RBP4.39□□□□□ -1.71
TDP1-217ENST00000557782 IRF7Q92985 503 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 C18orf8Q96DM3 657 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 HHIPL1Q96JK4 782 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 SNX22Q96L94 193 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 BARD1Q99728 777 aaKnown RBP4.39□□□□□ -1.71
TDP1-217ENST00000557782 FAM83CQ9BQN1 747 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 STK31Q9BXU1 1019 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 OLA1Q9NTK5 396 aaKnown RBP4.39□□□□□ -1.71
TDP1-217ENST00000557782 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.39□□□□□ -1.71
TDP1-217ENST00000557782 BTBD7Q9P203 1132 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 COL20A1Q9P218 1284 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 IMPACTQ9P2X3 320 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 MAN2B2Q9Y2E5 1009 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 TAF6LQ9Y6J9 622 aa4.39□□□□□ -1.71
TDP1-217ENST00000557782 CCDC196A0A1B0GTZ2 297 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 IPO5O00410 1097 aaKnown RBP4.38□□□□□ -1.71
TDP1-217ENST00000557782 AKR1B10O60218 316 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 TBC1D4O60343 1298 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 CUTAO60888 179 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 CKMT1AP12532 417 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 AFMP43652 599 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 GALK1P51570 392 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 RTP1P59025 263 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 RPS16P62249 146 aaKnown RBP4.38□□□□□ -1.71
TDP1-217ENST00000557782 MEF2AQ02078 507 aaPredicted RBP4.38□□□□□ -1.71
TDP1-217ENST00000557782 MGAT5Q09328 741 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 NFATC3Q12968 1075 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 EFR3AQ14156 821 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 CCNG2Q16589 344 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 AOC3Q16853 763 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 FAM110CQ1W6H9 321 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 C3orf38Q5JPI3 329 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 SPECC1Q5M775 1068 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 TANGO2Q6ICL3 276 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 GALNT18Q6P9A2 607 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 CATSPERGQ6ZRH7 1159 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 MILR1Q7Z6M3 343 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 MOGAT3Q86VF5 341 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 HEATR4Q86WZ0 1026 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 C2CD5Q86YS7 1000 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 FTSJ3Q8IY81 847 aaKnown RBP4.38□□□□□ -1.71
TDP1-217ENST00000557782 ADGRG2Q8IZP9 1017 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 SDR16C5Q8N3Y7 309 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 CCDC150Q8NCX0 1101 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 NUP43Q8NFH3 380 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 WDR48Q8TAF3 677 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 SPPL3Q8TCT6 385 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 KBTBD7Q8WVZ9 684 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 IPCEF1Q8WWN9 437 aaPredicted RBP4.38□□□□□ -1.71
TDP1-217ENST00000557782 ASIC4Q96FT7 647 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms