RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 STXBP4Q6ZWJ1 553 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 UNC13DQ70J99 1090 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 THNSL1Q8IYQ7 743 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 CEP120Q8N960 986 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 KLHL23Q8NBE8 558 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 P2RX5Q93086 422 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 HPS3Q969F9 1004 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 ZBTB45Q96K62 511 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 ZNF558Q96NG5 402 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 FAM193BQ96PV7 902 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 CCDC94Q9BW85 323 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 FGFBP2Q9BYJ0 223 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 KANSL3Q9P2N6 904 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 STXBP5LQ9Y2K9 1186 aa11.59□□□□□ -0.55
HNRNPC-232ENST00000557442 PLXNA3P51805 1871 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 SCN1AP35498 2009 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 INPPL1O15357 1258 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 PIGRP01833 764 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 MYL1P05976 194 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 PPM1AP35813 382 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 GRM5P41594 1212 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 YARSP54577 528 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 FAM160A1Q05DH4 1040 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 GRIK3Q13003 919 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 L1TD1Q5T7N2 865 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 KCNT2Q6UVM3 1135 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 FMR1NBQ8N0W7 255 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 MICALL1Q8N3F8 863 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 CCDC34Q96HJ3 373 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 ACCSQ96QU6 501 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 NRDE2Q9H7Z3 1164 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 ALG13Q9NP73 1137 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 TOPORSQ9NS56 1045 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 EXOC1Q9NV70 894 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 DNAJB4Q9UDY4 337 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 EXOC7Q9UPT5 735 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 PCDHB13Q9Y5F0 798 aa11.58□□□□□ -0.56
HNRNPC-232ENST00000557442 MTCL1Q9Y4B5 1905 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 TSC2P49815 1807 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 PVALEFA0A1B0GWK0 134 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 TISP43B9A030 160 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 GRM6O15303 877 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 B4GALT3O60512 393 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 FGF18O76093 207 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 PRPF6O94906 941 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 ITGB1P05556 798 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 ALDH7A1P49419 539 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 BCAR1P56945 870 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 MCL1Q07820 350 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 KCNA1Q09470 495 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 PTPROQ16827 1216 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 SEZ6Q53EL9 994 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 SLC39A4Q6P5W5 647 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 ZNF280BQ86YH2 543 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 SYCP3Q8IZU3 236 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 TMEM87AQ8NBN3 555 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 GLIS3Q8NEA6 775 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 GSTCDQ8NEC7 633 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 MAFAQ8NHW3 353 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 ACAP3Q96P50 834 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 MSTO1Q9BUK6 570 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 STRA6Q9BX79 667 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 HAPLN2Q9GZV7 340 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 IKZF4Q9H2S9 585 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 MIOSQ9NXC5 875 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 PLAGL2Q9UPG8 496 aa11.57□□□□□ -0.56
HNRNPC-232ENST00000557442 UNC80Q8N2C7 3258 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 CARNS1A5YM72 827 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 NT5C1B-RDH14C9J2C7 533 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 ANKRD63C9JTQ0 380 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 PTGESO14684 152 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 EIF3DO15371 548 aaKnown RBP eCLIP11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 KLRC4O43908 158 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 GADD45BO75293 160 aaPredicted RBP11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 DDHD2O94830 711 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 SLC11A1P49279 550 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 EHHADHQ08426 723 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 GLRA4Q5JXX5 417 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 SLFN12LQ6IEE8 588 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 KANK3Q6NY19 840 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 SLC39A11Q8N1S5 342 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 POMGNT1Q8WZA1 660 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 CCDC47Q96A33 483 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 MRPL38Q96DV4 380 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 TMEM169Q96HH4 297 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 SNX27Q96L92 541 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 TMEM175Q9BSA9 504 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 LMAN2LQ9H0V9 348 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 CXCL16Q9H2A7 254 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 TMEM206Q9H813 350 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 SLC39A2Q9NP94 309 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 SPG21Q9NZD8 308 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 MTCH2Q9Y6C9 303 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 UBE4BO95155 1302 aa11.56□□□□□ -0.56
HNRNPC-232ENST00000557442 A0A0B4J269 797 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 OGTO15294 1046 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 KINO60870 393 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 NR1I2O75469 434 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 RPN1P04843 607 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms