RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RNF169Q8NCN4 708 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 TBCKQ8TEA7 893 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 SLC22A17Q8WUG5 538 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 ATOH1Q92858 354 aaPredicted RBP9.71□□□□□ -0.86
VRK1-206ENST00000557222 SLC26A6Q9BXS9 759 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 RHOBTB2Q9BYZ6 727 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 POMKQ9H5K3 350 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 KANSL3Q9P2N6 904 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 SUCLA2Q9P2R7 463 aaPredicted RBP9.71□□□□□ -0.86
VRK1-206ENST00000557222 PCDHA4Q9UN74 947 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 SNX14Q9Y5W7 946 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 GVINP1Q7Z2Y8 2422 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 A0A087WZ62 844 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.7□□□□□ -0.86
VRK1-206ENST00000557222 M0R2N6 131 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 GAS2O43903 313 aaKnown RBP9.7□□□□□ -0.86
VRK1-206ENST00000557222 OFD1O75665 1012 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 DEXIO95424 95 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 BRD1O95696 1058 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 C1RP00736 705 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 RHOQP17081 205 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 PSMC5P62195 406 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 FOXK2Q01167 660 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 CLN3Q13286 438 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 PCBP1Q15365 356 aaKnown RBP eCLIP9.7□□□□□ -0.86
VRK1-206ENST00000557222 MTERF2Q49AM1 385 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 SRGAP1Q7Z6B7 1085 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 ETNPPLQ8TBG4 499 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 URGCPQ8TCY9 931 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 ACSF2Q96CM8 615 aaPredicted RBP9.7□□□□□ -0.86
VRK1-206ENST00000557222 FAM20AQ96MK3 541 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 FDXACB1Q9BRP7 624 aaPredicted RBP9.7□□□□□ -0.86
VRK1-206ENST00000557222 TMEM175Q9BSA9 504 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 APOL5Q9BWW9 433 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 EMILIN2Q9BXX0 1053 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 NRDE2Q9H7Z3 1164 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 UBN1Q9NPG3 1134 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 CYP26B1Q9NR63 512 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 FAM105AQ9NUU6 356 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 TBC1D13Q9NVG8 400 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 VPS54Q9P1Q0 977 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 DPP7Q9UHL4 492 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 SSX2IPQ9Y2D8 614 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 CNTNAP2Q9UHC6 1331 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 ZNF292O60281 2723 aa9.7□□□□□ -0.86
VRK1-206ENST00000557222 NT5C1B-RDH14C9J2C7 533 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 ASAP2O43150 1006 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 CHMP2AO43633 222 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 ZC3H11AO75152 810 aaKnown RBP eCLIP9.69□□□□□ -0.86
VRK1-206ENST00000557222 REC8O95072 547 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 ALDH2P05091 517 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 CPA1P15085 419 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 FGFR4P22455 802 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 NBL1P41271 181 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 RNASELQ05823 741 aaKnown RBP9.69□□□□□ -0.86
VRK1-206ENST00000557222 SSRP1Q08945 709 aaKnown RBP9.69□□□□□ -0.86
VRK1-206ENST00000557222 PPP2R5CQ13362 524 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 DRP2Q13474 957 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 RARS2Q5T160 578 aaKnown RBP9.69□□□□□ -0.86
VRK1-206ENST00000557222 C15orf39Q6ZRI6 1047 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 ANO5Q75V66 913 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 OTOP3Q7RTS5 596 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 CATSPER4Q7RTX7 472 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 GPR149Q86SP6 731 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 CABP7Q86V35 215 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 RHPN2Q8IUC4 686 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 BLIDQ8IZY5 108 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 VWA5B2Q8N398 1253 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 CNNM3Q8NE01 707 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 CMASQ8NFW8 434 aaPredicted RBP9.69□□□□□ -0.86
VRK1-206ENST00000557222 ZNF274Q96GC6 653 aaPredicted RBP9.69□□□□□ -0.86
VRK1-206ENST00000557222 ZNF668Q96K58 619 aaPredicted RBP9.69□□□□□ -0.86
VRK1-206ENST00000557222 SFXN1Q9H9B4 322 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 IFT122Q9HBG6 1241 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 AGPAT5Q9NUQ2 364 aa9.69□□□□□ -0.86
VRK1-206ENST00000557222 DBR1Q9UK59 544 aaKnown RBP9.69□□□□□ -0.86
VRK1-206ENST00000557222 PIN4Q9Y237 131 aaKnown RBP9.69□□□□□ -0.86
VRK1-206ENST00000557222 TBX3O15119 743 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 INPPL1O15357 1258 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 CSDE1O75534 798 aaKnown RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 PAPLNO95428 1278 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 PDGFBP01127 241 aaPredicted RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 P4HBP07237 508 aaKnown RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 GCFC2P16383 781 aaKnown RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 EPCAMP16422 314 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 AXLP30530 894 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 QARSP47897 775 aaKnown RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 SLC11A1P49279 550 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 NONOQ15233 471 aaKnown RBP eCLIP9.68□□□□□ -0.86
VRK1-206ENST00000557222 PTPN14Q15678 1187 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 PPP4R3AQ6IN85 833 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 ELMSAN1Q6PJG2 1045 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 CPLX2Q6PUV4 134 aaKnown RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 RUFY3Q7L099 469 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 KRT25Q7Z3Z0 450 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 TMEM173Q86WV6 379 aaPredicted RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 GPR65Q8IYL9 337 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 HDAC7Q8WUI4 952 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 SLC7A3Q8WY07 619 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 SNX27Q96L92 541 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms