RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 NOD1Q9Y239 953 aa25.79■■□□□ 1.72
SIX4-203ENST00000556952 SIK3Q9Y2K2 1263 aa25.79■■□□□ 1.72
SIX4-203ENST00000556952 RANBP2P49792 3224 aaKnown RBP25.79■■□□□ 1.72
SIX4-203ENST00000556952 TANC1Q9C0D5 1861 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 FAM189A1O60320 539 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 N4BP1O75113 896 aaKnown RBP25.78■■□□□ 1.72
SIX4-203ENST00000556952 MCF2P10911 925 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 AXLP30530 894 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 FIGNQ5HY92 759 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 CRELD2Q6UXH1 353 aaPredicted RBP25.78■■□□□ 1.72
SIX4-203ENST00000556952 CATSPER4Q7RTX7 472 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 PPFIBP1Q86W92 1011 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 PARD3BQ8TEW8 1205 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 CDT1Q9H211 546 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 PRKAG2Q9UGJ0 569 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 UMODL1Q5DID0 1318 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 A0A1B0GUA9 196 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 CAND2O75155 1236 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 TRIM49P0CI25 452 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 TRIM49CP0CI26 452 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 FMO5P49326 533 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 PSMD6Q15008 389 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 APBB1IPQ7Z5R6 666 aaPredicted RBP25.78■■□□□ 1.72
SIX4-203ENST00000556952 ZBTB33Q86T24 672 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 PCMTD1Q96MG8 357 aaPredicted RBP25.78■■□□□ 1.72
SIX4-203ENST00000556952 ADPGKQ9BRR6 497 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 PPP1R12CQ9BZL4 782 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 RBAKQ9NYW8 714 aaPredicted RBP25.78■■□□□ 1.72
SIX4-203ENST00000556952 CDY2AQ9Y6F7 541 aa25.78■■□□□ 1.72
SIX4-203ENST00000556952 HARSP12081 509 aaKnown RBP25.77■■□□□ 1.72
SIX4-203ENST00000556952 ACOT2P49753 483 aa25.77■■□□□ 1.72
SIX4-203ENST00000556952 KYAT1Q16773 422 aa25.77■■□□□ 1.72
SIX4-203ENST00000556952 EEF1DP3Q658K8 133 aa25.77■■□□□ 1.72
SIX4-203ENST00000556952 TMEM40Q8WWA1 233 aa25.77■■□□□ 1.72
SIX4-203ENST00000556952 WNT8BQ93098 351 aa25.77■■□□□ 1.72
SIX4-203ENST00000556952 CPB2Q96IY4 423 aa25.77■■□□□ 1.72
SIX4-203ENST00000556952 SCN5AQ14524 2016 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 P4HA2O15460 535 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 GYPCP04921 128 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 TRIM21P19474 475 aaKnown RBP25.76■■□□□ 1.71
SIX4-203ENST00000556952 GTF2H1P32780 548 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 DLG4P78352 724 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 MGAT3Q09327 533 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 CCDC155Q8N6L0 562 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 PLEKHO2Q8TD55 490 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 DHX38Q92620 1227 aaKnown RBP25.76■■□□□ 1.71
SIX4-203ENST00000556952 AGPAT5Q9NUQ2 364 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 ANK1P16157 1881 aa25.76■■□□□ 1.71
SIX4-203ENST00000556952 PMM2O15305 246 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 MYL7Q01449 175 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 POU5F1Q01860 360 aaKnown RBP25.75■■□□□ 1.71
SIX4-203ENST00000556952 KCNMA1Q12791 1236 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 EXOC3L4Q17RC7 722 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 DCAF4L1Q3SXM0 396 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 C1orf220Q5T0J3 134 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 NOTUMQ6P988 496 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 GBP6Q6ZN66 633 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 CNGA4Q8IV77 575 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 BRSK2Q8IWQ3 736 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 CCDC127Q96BQ5 260 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 TTYH3Q9C0H2 523 aa25.75■■□□□ 1.71
SIX4-203ENST00000556952 CPSF3Q9UKF6 684 aaKnown RBP25.75■■□□□ 1.71
SIX4-203ENST00000556952 LRRIQ3A6PVS8 624 aaPredicted RBP25.74■■□□□ 1.71
SIX4-203ENST00000556952 RAG1P15918 1043 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 FGFR4P22455 802 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 THPOP40225 353 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 CLDN10P78369 228 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 RBL2Q08999 1139 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 CETN1Q12798 172 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 ZBTB41Q5SVQ8 909 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 PRPF38BQ5VTL8 546 aaKnown RBP25.74■■□□□ 1.71
SIX4-203ENST00000556952 BADQ92934 168 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 FNBP1Q96RU3 617 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 HIPK3Q9H422 1215 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 MMRN2Q9H8L6 949 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 RALGAPA2Q2PPJ7 1873 aa25.74■■□□□ 1.71
SIX4-203ENST00000556952 A0A1W2PQJ5 194 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 AKR1B15C9JRZ8 316 aaPredicted RBP25.73■■□□□ 1.71
SIX4-203ENST00000556952 HOXA11P31270 313 aaPredicted RBP25.73■■□□□ 1.71
SIX4-203ENST00000556952 CYP2C18P33260 490 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 MAGEA10P43363 369 aaPredicted RBP25.73■■□□□ 1.71
SIX4-203ENST00000556952 KLK7P49862 253 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 SURF1Q15526 300 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 TRIM71Q2Q1W2 868 aaKnown RBP25.73■■□□□ 1.71
SIX4-203ENST00000556952 CBWD6Q4V339 395 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 CBWD3Q5JTY5 395 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 CBWD5Q5RIA9 395 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 SLC27A1Q6PCB7 646 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 CDR2LQ86X02 465 aaPredicted RBP25.73■■□□□ 1.71
SIX4-203ENST00000556952 LRRC8AQ8IWT6 810 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 NEK11Q8NG66 645 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 CCDC51Q96ER9 411 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 GCNT4Q9P109 453 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 MFAP3LO75121 409 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 TIMP1P01033 207 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 CHRNA1P02708 482 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 CASP14P31944 242 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 MXI1P50539 228 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 PPP3CAQ08209 521 aa25.73■■□□□ 1.71
SIX4-203ENST00000556952 FAM26DQ5JW98 314 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms