RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 MED15Q96RN5 788 aa17.92■□□□□ 0.46
PCNX4-213ENST00000556907 MRPL9Q9BYD2 267 aaKnown RBP17.92■□□□□ 0.46
PCNX4-213ENST00000556907 RSAD1Q9HA92 442 aa17.92■□□□□ 0.46
PCNX4-213ENST00000556907 STYXL1Q9Y6J8 313 aa17.92■□□□□ 0.46
PCNX4-213ENST00000556907 PDCD11Q14690 1871 aaKnown RBP17.91■□□□□ 0.46
PCNX4-213ENST00000556907 GRXCR1A8MXD5 290 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 GOLGA6L19H0YKK7 550 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 KIAA0391O15091 583 aaKnown RBP17.91■□□□□ 0.46
PCNX4-213ENST00000556907 INPPL1O15357 1258 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 DNAJB2P25686 324 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 GRM5P41594 1212 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 POU5F1Q01860 360 aaKnown RBP17.91■□□□□ 0.46
PCNX4-213ENST00000556907 ZCWPW2Q504Y3 356 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 EEF1DP3Q658K8 133 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 CENPPQ6IPU0 288 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 TTI2Q6NXR4 508 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 FAM117BQ6P1L5 589 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 RNF169Q8NCN4 708 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 TIFAQ96CG3 184 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 SAMD11Q96NU1 681 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 CCDC94Q9BW85 323 aaPredicted RBP17.91■□□□□ 0.46
PCNX4-213ENST00000556907 CDT1Q9H211 546 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 SLC28A3Q9HAS3 691 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 MAPK8IP1Q9UQF2 711 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 RWDD3Q9Y3V2 267 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 CITO14578 2027 aa17.91■□□□□ 0.46
PCNX4-213ENST00000556907 A0A0B4J269 797 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 ABLIM1O14639 778 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 PRPF6O94906 941 aaKnown RBP17.9■□□□□ 0.46
PCNX4-213ENST00000556907 GARTP22102 1010 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 MATR3P43243 847 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCNX4-213ENST00000556907 RABGGTBP53611 331 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 TPM4P67936 248 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 LRRC63Q05C16 580 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 BTG3Q14201 252 aaPredicted RBP17.9■□□□□ 0.46
PCNX4-213ENST00000556907 SPATA1Q5VX52 437 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 AGMOQ6ZNB7 445 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 TMCO2Q7Z6W1 182 aaPredicted RBP17.9■□□□□ 0.46
PCNX4-213ENST00000556907 CDR2LQ86X02 465 aaPredicted RBP17.9■□□□□ 0.46
PCNX4-213ENST00000556907 FIBCD1Q8N539 461 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 GOLGA5Q8TBA6 731 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 URGCPQ8TCY9 931 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 GBP3Q9H0R5 595 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 TOPORSQ9NS56 1045 aaPredicted RBP17.9■□□□□ 0.46
PCNX4-213ENST00000556907 NFE2L3Q9Y4A8 694 aa17.9■□□□□ 0.46
PCNX4-213ENST00000556907 FNDC1Q4ZHG4 1894 aaPredicted RBP17.89■□□□□ 0.45
PCNX4-213ENST00000556907 TRIM49BA6NDI0 452 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 OFD1O75665 1012 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 LDHAP00338 332 aaKnown RBP17.89■□□□□ 0.45
PCNX4-213ENST00000556907 FGFR1P11362 822 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 IBSPP21815 317 aaPredicted RBP17.89■□□□□ 0.45
PCNX4-213ENST00000556907 YARSP54577 528 aaKnown RBP17.89■□□□□ 0.45
PCNX4-213ENST00000556907 KNOP1Q1ED39 458 aaKnown RBP17.89■□□□□ 0.45
PCNX4-213ENST00000556907 HS2ST1Q7LGA3 356 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 LRRC43Q8N309 656 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 CASD1Q96PB1 797 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 TSPAN18Q96SJ8 248 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 HSD3B7Q9H2F3 369 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 KCTD10Q9H3F6 313 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 SEMA6BQ9H3T3 888 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 NXF3Q9H4D5 531 aaKnown RBP17.89■□□□□ 0.45
PCNX4-213ENST00000556907 RNF19AQ9NV58 838 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 ANKFY1Q9P2R3 1169 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 USP20Q9Y2K6 914 aa17.89■□□□□ 0.45
PCNX4-213ENST00000556907 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.89■□□□□ 0.45
PCNX4-213ENST00000556907 GBF1Q92538 1859 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 TBKBP1A7MCY6 615 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 OGTO15294 1046 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 CA3P07451 260 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 CLTAP09496 248 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 PBX2P40425 430 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 PMS1P54277 932 aaKnown RBP17.88■□□□□ 0.45
PCNX4-213ENST00000556907 STX17P56962 302 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 KCNA1Q09470 495 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 NOMO2Q5JPE7 1267 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 CLLU1OSQ5K130 101 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 ZBTB33Q86T24 672 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 HELQQ8TDG4 1101 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 NOC3LQ8WTT2 800 aaKnown RBP17.88■□□□□ 0.45
PCNX4-213ENST00000556907 TMEM174Q8WUU8 243 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 POMGNT1Q8WZA1 660 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 CLP1Q92989 425 aaKnown RBP17.88■□□□□ 0.45
PCNX4-213ENST00000556907 LPPQ93052 612 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 ZBTB45Q96K62 511 aaPredicted RBP17.88■□□□□ 0.45
PCNX4-213ENST00000556907 ACAP3Q96P50 834 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 TSG101Q99816 390 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 MSTO1Q9BUK6 570 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 PLEKHA5Q9HAU0 1116 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 AAASQ9NRG9 546 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 TYW1Q9NV66 732 aaKnown RBP17.88■□□□□ 0.45
PCNX4-213ENST00000556907 SNTG2Q9NY99 539 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 PARP2Q9UGN5 583 aa17.88■□□□□ 0.45
PCNX4-213ENST00000556907 YBX2Q9Y2T7 364 aaKnown RBP17.88■□□□□ 0.45
PCNX4-213ENST00000556907 ANKRD63C9JTQ0 380 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 ZNF18P17022 549 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 HOXD13P35453 343 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 EDRF1Q3B7T1 1238 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 CDKAL1Q5VV42 579 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 PPP2R2DQ66LE6 453 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 SLC39A4Q6P5W5 647 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms