RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 UBE2ZQ9H832 354 aaPredicted RBP25.05■■□□□ 1.6
TDP1-216ENST00000556867 MAGEF1Q9HAY2 307 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 FAN1Q9Y2M0 1017 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 PCDHGC5Q9Y5F6 944 aa25.05■■□□□ 1.6
TDP1-216ENST00000556867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.04■■□□□ 1.6
TDP1-216ENST00000556867 FRMD3A2A2Y4 597 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 PTGESO14684 152 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 NRP1O14786 923 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 NOLC1Q14978 699 aaKnown RBP eCLIP25.04■■□□□ 1.6
TDP1-216ENST00000556867 ZBTB33Q86T24 672 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 DDX53Q86TM3 631 aaKnown RBP25.04■■□□□ 1.6
TDP1-216ENST00000556867 MAP4K3Q8IVH8 894 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 MICAL1Q8TDZ2 1067 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 PABPC5Q96DU9 382 aaKnown RBP25.04■■□□□ 1.6
TDP1-216ENST00000556867 BICD1Q96G01 975 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 ZBTB45Q96K62 511 aaPredicted RBP25.04■■□□□ 1.6
TDP1-216ENST00000556867 TCF25Q9BQ70 676 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 SCAND2PQ9GZW5 306 aaPredicted RBP25.04■■□□□ 1.6
TDP1-216ENST00000556867 NGRNQ9NPE2 291 aaKnown RBP25.04■■□□□ 1.6
TDP1-216ENST00000556867 ANKFY1Q9P2R3 1169 aa25.04■■□□□ 1.6
TDP1-216ENST00000556867 POLR2DO15514 142 aaKnown RBP25.03■■□□□ 1.6
TDP1-216ENST00000556867 MRPS5P82675 430 aaKnown RBP25.03■■□□□ 1.6
TDP1-216ENST00000556867 MCL1Q07820 350 aa25.03■■□□□ 1.6
TDP1-216ENST00000556867 ADALQ6DHV7 355 aa25.03■■□□□ 1.6
TDP1-216ENST00000556867 HVCN1Q96D96 273 aa25.03■■□□□ 1.6
TDP1-216ENST00000556867 PYM1Q9BRP8 204 aaKnown RBP25.03■■□□□ 1.6
TDP1-216ENST00000556867 ENTPD7Q9NQZ7 604 aa25.03■■□□□ 1.6
TDP1-216ENST00000556867 OLFML3Q9NRN5 406 aa25.03■■□□□ 1.6
TDP1-216ENST00000556867 MARCH5Q9NX47 278 aa25.03■■□□□ 1.6
TDP1-216ENST00000556867 STK39Q9UEW8 545 aa25.03■■□□□ 1.6
TDP1-216ENST00000556867 XIRP2A4UGR9 3374 aa25.03■■□□□ 1.6
TDP1-216ENST00000556867 HNRNPDLO14979 420 aaKnown RBP25.02■■□□□ 1.6
TDP1-216ENST00000556867 CLDN3O15551 220 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 PPP1R37O75864 691 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 IDEP14735 1019 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 OR1G1P47890 313 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 LIG4P49917 911 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 YARSP54577 528 aaKnown RBP25.02■■□□□ 1.6
TDP1-216ENST00000556867 AMPD3Q01432 767 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 TFF2Q03403 129 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 AAK1Q2M2I8 961 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 CTC1Q2NKJ3 1217 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 PLPP4Q5VZY2 271 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 CNNM4Q6P4Q7 775 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 ZNF720Q7Z2F6 126 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 TMC7Q7Z402 723 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 STAMQ92783 540 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 ASB2Q96Q27 587 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 VN1R3Q9BXE9 311 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 TRIM9Q9C026 710 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 ZBP1Q9H171 429 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 CXCL16Q9H2A7 254 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 TOPORSQ9NS56 1045 aaPredicted RBP25.02■■□□□ 1.6
TDP1-216ENST00000556867 KCNH3Q9ULD8 1083 aa25.02■■□□□ 1.6
TDP1-216ENST00000556867 PRG3Q9Y2Y8 225 aaPredicted RBP25.02■■□□□ 1.6
TDP1-216ENST00000556867 NR1I2O75469 434 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 THP07101 528 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 HARSP12081 509 aaKnown RBP25.01■■□□□ 1.59
TDP1-216ENST00000556867 CMA1P23946 247 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 TUSC3Q13454 348 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 NAB2Q15742 525 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 ZC2HC1CQ53FD0 456 aaPredicted RBP25.01■■□□□ 1.59
TDP1-216ENST00000556867 XKR4Q5GH76 650 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 VPS52Q8N1B4 723 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 STRA6Q9BX79 667 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 HAPLN2Q9GZV7 340 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 MRPL44Q9H9J2 332 aaKnown RBP25.01■■□□□ 1.59
TDP1-216ENST00000556867 PANK4Q9NVE7 773 aa25.01■■□□□ 1.59
TDP1-216ENST00000556867 GTF2F1P35269 517 aaKnown RBP eCLIP25■■□□□ 1.59
TDP1-216ENST00000556867 NRIP1P48552 1158 aa25■■□□□ 1.59
TDP1-216ENST00000556867 OSTNP61366 133 aa25■■□□□ 1.59
TDP1-216ENST00000556867 SMC1AQ14683 1233 aaKnown RBP25■■□□□ 1.59
TDP1-216ENST00000556867 HERC4Q5GLZ8 1057 aaPredicted RBP25■■□□□ 1.59
TDP1-216ENST00000556867 ALKAL1Q6UXT8 129 aa25■■□□□ 1.59
TDP1-216ENST00000556867 CCDC65Q8IXS2 484 aa25■■□□□ 1.59
TDP1-216ENST00000556867 EFHBQ8N7U6 833 aa25■■□□□ 1.59
TDP1-216ENST00000556867 SNX27Q96L92 541 aa25■■□□□ 1.59
TDP1-216ENST00000556867 ACAP3Q96P50 834 aa25■■□□□ 1.59
TDP1-216ENST00000556867 CDCA3Q99618 268 aaPredicted RBP25■■□□□ 1.59
TDP1-216ENST00000556867 TLE6Q9H808 572 aa25■■□□□ 1.59
TDP1-216ENST00000556867 CLDND1Q9NY35 253 aa25■■□□□ 1.59
TDP1-216ENST00000556867 PDCD11Q14690 1871 aaKnown RBP25■■□□□ 1.59
TDP1-216ENST00000556867 FSD2A1L4K1 749 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 EFEMP2O95967 443 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 CTSAP10619 480 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 BMS1Q14692 1282 aaKnown RBP24.99■■□□□ 1.59
TDP1-216ENST00000556867 DUSP6Q16828 381 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 TJAP1Q5JTD0 557 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 SLC39A4Q6P5W5 647 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 MRPL43Q8N983 215 aaKnown RBP24.99■■□□□ 1.59
TDP1-216ENST00000556867 PPP1R10Q96QC0 940 aaKnown RBP24.99■■□□□ 1.59
TDP1-216ENST00000556867 C7orf25Q9BPX7 421 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 COLEC11Q9BWP8 271 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 IGFLR1Q9H665 355 aa24.99■■□□□ 1.59
TDP1-216ENST00000556867 C2orf71A6NGG8 1288 aa24.98■■□□□ 1.59
TDP1-216ENST00000556867 HIDE1A8MVS5 230 aa24.98■■□□□ 1.59
TDP1-216ENST00000556867 PFKFB1P16118 471 aa24.98■■□□□ 1.59
TDP1-216ENST00000556867 KCNA5P22460 613 aa24.98■■□□□ 1.59
TDP1-216ENST00000556867 MATR3P43243 847 aaKnown RBP eCLIP24.98■■□□□ 1.59
TDP1-216ENST00000556867 COASYQ13057 564 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms