RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 KCND2Q9NZV8 630 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 STK39Q9UEW8 545 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 CDH22Q9UJ99 828 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 MORC2Q9Y6X9 1032 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-224ENST00000556737 VWA8A3KMH1 1905 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 TRIP11Q15643 1979 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 C2orf16Q68DN1 1984 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 CCDC169A6NNP5 214 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 K7ERI5 159 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 MEFVO15553 781 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-224ENST00000556737 BRD1O95696 1058 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 ALDH2P05091 517 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 CNPP09543 421 aaKnown RBP11.35□□□□□ -0.59
SHMT2-224ENST00000556737 SRGAP2BP0DMP2 458 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 MAPTP10636 758 aaKnown RBP11.35□□□□□ -0.59
SHMT2-224ENST00000556737 SSTR3P32745 418 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-224ENST00000556737 CA8P35219 290 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 GRM5P41594 1212 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 NCKAP1LP55160 1127 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 GIT2Q14161 759 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 ZNF568Q3ZCX4 644 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 GPBP1Q86WP2 473 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 RABGGTAQ92696 567 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 RAD54LQ92698 747 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 CASP10Q92851 521 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 KCNN1Q92952 543 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 KLHL5Q96PQ7 755 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 REEP2Q9BRK0 252 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 NTPCRQ9BSD7 190 aaKnown RBP11.35□□□□□ -0.59
SHMT2-224ENST00000556737 TARS2Q9BW92 718 aaKnown RBP11.35□□□□□ -0.59
SHMT2-224ENST00000556737 MRPL4Q9BYD3 311 aaKnown RBP11.35□□□□□ -0.59
SHMT2-224ENST00000556737 ODF2LQ9ULJ1 636 aa11.35□□□□□ -0.59
SHMT2-224ENST00000556737 CASTOR2A6NHX0 329 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 LOC730098B7Z3J9 87 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 PI4K2BG5E9Z4 385 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 STX6O43752 255 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 KIF4AO95239 1232 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 URODP06132 367 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 MARCKSP29966 332 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-224ENST00000556737 UBA7P41226 1012 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 GLUD2P49448 558 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 CLCN4P51793 760 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 ZNF131P52739 623 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 DSG1Q02413 1049 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 TUSC3Q13454 348 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 MCM6Q14566 821 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 HSP90AA2PQ14568 343 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-224ENST00000556737 CBX2Q14781 532 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-224ENST00000556737 XKR4Q5GH76 650 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 SPECC1Q5M775 1068 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 KIAA0319Q5VV43 1072 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 FUT10Q6P4F1 479 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 CALML4Q96GE6 196 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 EPSTI1Q96J88 318 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 B3GALT6Q96L58 329 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 CLIC6Q96NY7 704 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 PPP1R10Q96QC0 940 aaKnown RBP11.34□□□□□ -0.59
SHMT2-224ENST00000556737 FIZ1Q96SL8 496 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 POP1Q99575 1024 aaKnown RBP11.34□□□□□ -0.59
SHMT2-224ENST00000556737 APOL5Q9BWW9 433 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 GPR62Q9BZJ7 368 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 CCSER1Q9C0I3 900 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 CHST7Q9NS84 486 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 ADAM28Q9UKQ2 775 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 GDAQ9Y2T3 454 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 SRPRBQ9Y5M8 271 aaKnown RBP11.34□□□□□ -0.59
SHMT2-224ENST00000556737 CITO14578 2027 aa11.34□□□□□ -0.59
SHMT2-224ENST00000556737 C2CD2LO14523 706 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 MCF2P10911 925 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 HOXB8P17481 243 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-224ENST00000556737 IGFBP6P24592 240 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-224ENST00000556737 NASPP49321 788 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-224ENST00000556737 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
SHMT2-224ENST00000556737 GLRA4Q5JXX5 417 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 ALKAL1Q6UXT8 129 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 HASPINQ8TF76 798 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 LARP4BQ92615 738 aaKnown RBP11.33□□□□□ -0.6
SHMT2-224ENST00000556737 SNX27Q96L92 541 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 COLEC11Q9BWP8 271 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 PHF7Q9BWX1 381 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-224ENST00000556737 HAPLN2Q9GZV7 340 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 ZSCAN16Q9H4T2 348 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-224ENST00000556737 RXFP1Q9HBX9 757 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 MRPL17Q9NRX2 175 aaKnown RBP11.33□□□□□ -0.6
SHMT2-224ENST00000556737 DZANK1Q9NVP4 752 aa11.33□□□□□ -0.6
SHMT2-224ENST00000556737 SF3B1O75533 1304 aaKnown RBP eCLIP11.33□□□□□ -0.65e-8■■■■■ 37.4
SHMT2-224ENST00000556737 A0A087X0B3 334 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 TEX28O15482 410 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 NR1I2O75469 434 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 TOM1L1O75674 476 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 THP07101 528 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 CEBPZQ03701 1054 aaKnown RBP11.32□□□□□ -0.6
SHMT2-224ENST00000556737 SOX4Q06945 474 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-224ENST00000556737 DHX8Q14562 1220 aaKnown RBP11.32□□□□□ -0.6
SHMT2-224ENST00000556737 SLC39A14Q15043 492 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
SHMT2-224ENST00000556737 RTP2Q5QGT7 225 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms