RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 PTPRBP23467 1997 aa4.85□□□□□ -1.63
ATXN3-242ENST00000556644 AHCTF1Q8WYP5 2266 aa4.85□□□□□ -1.63
ATXN3-242ENST00000556644 MGAQ8IWI9 3026 aa4.85□□□□□ -1.63
ATXN3-242ENST00000556644 ADAMTS9Q9P2N4 1935 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 CCDC163A0A0D9SF12 145 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 UPK3BL1B0FP48 263 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 UPK3BL2E5RIL1 263 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 SPECC1L-ADORA2AF8WAN1 911 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 ZNF263O14978 683 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 PPP1R11O60927 126 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-242ENST00000556644 XYLBO75191 536 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 GPR32O75388 356 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 OFD1O75665 1012 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 POMCP01189 267 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 IFIT2P09913 472 aaKnown RBP4.84□□□□□ -1.63
ATXN3-242ENST00000556644 KCNA2P16389 499 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 PSMC3P17980 439 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 CTHP32929 405 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 OR1G1P47890 313 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 NOVP48745 357 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 CLCN3P51790 818 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 DGKEP52429 567 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 DSG1Q02413 1049 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 CCDC173Q0VFZ6 552 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 CCINQ13939 588 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 MAPK6Q16659 721 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 ALDH1L2Q3SY69 923 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 TMPRSS7Q7RTY8 843 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 TRMT1LQ7Z2T5 733 aaKnown RBP4.84□□□□□ -1.63
ATXN3-242ENST00000556644 KRT25Q7Z3Z0 450 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 MINDY1Q8N5J2 469 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 METTL13Q8N6R0 699 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 CSGALNACT1Q8TDX6 532 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 RABGGTAQ92696 567 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 TCEAL4Q96EI5 215 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 ZFYVE19Q96K21 471 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 SCLT1Q96NL6 688 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 FAM193BQ96PV7 902 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-242ENST00000556644 AZI2Q9H6S1 392 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 EVLQ9UI08 416 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-242ENST00000556644 APOBEC2Q9Y235 224 aaKnown RBP4.84□□□□□ -1.63
ATXN3-242ENST00000556644 PCDHB15Q9Y5E8 787 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 ATMQ13315 3056 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 FLNCQ14315 2725 aa4.84□□□□□ -1.63
ATXN3-242ENST00000556644 USP9YO00507 2555 aaPredicted RBP4.84□□□□□ -1.64
ATXN3-242ENST00000556644 GON4LQ3T8J9 2241 aa4.84□□□□□ -1.64
ATXN3-242ENST00000556644 THADAQ6YHU6 1953 aa4.84□□□□□ -1.64
ATXN3-242ENST00000556644 SALL3Q9BXA9 1300 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 GCOM1H8Y6P7 765 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 ARNTLO00327 626 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 PLK4O00444 970 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 ADAM12O43184 909 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 ZNF862O60290 1169 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 ALDH2P05091 517 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 RHOP08100 348 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 HNRNPA1P09651 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 POLR2MP0CAP2 368 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 SNHG28P0DPA3 235 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 GJA1P17302 382 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 CR2P20023 1033 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 PTGER3P43115 390 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 PHKA2P46019 1235 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 CLDN6P56747 220 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 NLRP11P59045 1033 aaKnown RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 NFATC3Q12968 1075 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 CAMK2BQ13554 666 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 UBAP2LQ14157 1087 aaKnown RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 KARSQ15046 597 aaKnown RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 TWF2Q6IBS0 349 aaKnown RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 ZSCAN25Q6NSZ9 544 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 ZNF574Q6ZN55 896 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 NAXDQ8IW45 347 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 CMTR1Q8N1G2 835 aaKnown RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 RHPN1Q8TCX5 695 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 URGCPQ8TCY9 931 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 APPBP2Q92624 585 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 RSPRY1Q96DX4 576 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 ZSWIM3Q96MP5 696 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 MBOAT7Q96N66 472 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 SEC62Q99442 399 aaKnown RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 SENP7Q9BQF6 1050 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 APOL6Q9BWW8 343 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 AMNQ9BXJ7 453 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 GPR62Q9BZJ7 368 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 MAF1Q9H063 256 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 JMJD4Q9H9V9 463 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 SNTG2Q9NY99 539 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 GTSE1Q9NYZ3 720 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 GDE1Q9NZC3 331 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 KCNH3Q9ULD8 1083 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 AKT3Q9Y243 479 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 SSX2IPQ9Y2D8 614 aa4.83□□□□□ -1.64
ATXN3-242ENST00000556644 HEMK1Q9Y5R4 338 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 MTCL1Q9Y4B5 1905 aaKnown RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 PDCD11Q14690 1871 aaKnown RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 SETD2Q9BYW2 2564 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-242ENST00000556644 EVPLQ92817 2033 aa4.82□□□□□ -1.64
ATXN3-242ENST00000556644 MYH6P13533 1939 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms