RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 RNF169Q8NCN4 708 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 LPPQ93052 612 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 EEF2KMTQ96G04 330 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 FAM213AQ9BRX8 229 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 APOL6Q9BWW8 343 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 SNTG2Q9NY99 539 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 CXXC1Q9P0U4 656 aaPredicted RBP18.99■□□□□ 0.63
TUBB3-211ENST00000556536 BICDL2A1A5D9 508 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 MEFVO15553 781 aaPredicted RBP18.98■□□□□ 0.63
TUBB3-211ENST00000556536 ZNF623O75123 536 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 STAG3L1P0CL83 205 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 NR2F2P24468 414 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 AKAP5P24588 427 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 GRM5P41594 1212 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 RAB27AP51159 221 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 ZNF445P59923 1031 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 CT47A1Q5JQC4 288 aaPredicted RBP18.98■□□□□ 0.63
TUBB3-211ENST00000556536 ZNF697Q5TEC3 545 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 LRSAM1Q6UWE0 723 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 CRELD2Q6UXH1 353 aaPredicted RBP18.98■□□□□ 0.63
TUBB3-211ENST00000556536 SLC9A9Q8IVB4 645 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 ZC3H3Q8IXZ2 948 aaKnown RBP18.98■□□□□ 0.63
TUBB3-211ENST00000556536 CRIPAKQ8N1N5 446 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 NOC3LQ8WTT2 800 aaKnown RBP18.98■□□□□ 0.63
TUBB3-211ENST00000556536 TMEM174Q8WUU8 243 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 HERVK_113Q902F9 699 aa18.98■□□□□ 0.63
TUBB3-211ENST00000556536 SPTBN5Q9NRC6 3674 aaKnown RBP18.97■□□□□ 0.63
TUBB3-211ENST00000556536 ZBBXA8MT70 800 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 EXTL3O43909 919 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 EFCAB14O75071 495 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 SKIP12755 728 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 CASP4P49662 377 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 ADAM9Q13443 819 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 MYBPC2Q14324 1141 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 C9orf50Q5SZB4 431 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 FOXR2Q6PJQ5 311 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 LRRC55Q6ZSA7 311 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 TMCO2Q7Z6W1 182 aaPredicted RBP18.97■□□□□ 0.63
TUBB3-211ENST00000556536 CBWD2Q8IUF1 395 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 GPD1LQ8N335 351 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 XXYLT1Q8NBI6 393 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 RDH13Q8NBN7 331 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 FBXL18Q96ME1 805 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 FAM161BQ96MY7 647 aa18.97■□□□□ 0.63
TUBB3-211ENST00000556536 CPSF3Q9UKF6 684 aaKnown RBP18.97■□□□□ 0.63
TUBB3-211ENST00000556536 KIAA0391O15091 583 aaKnown RBP18.96■□□□□ 0.63
TUBB3-211ENST00000556536 EXOC3O60645 756 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 AMHP03971 560 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 CLTAP09496 248 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 ITGA4P13612 1032 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 RPL13P26373 211 aaKnown RBP18.96■□□□□ 0.63
TUBB3-211ENST00000556536 FKBP3Q00688 224 aaKnown RBP18.96■□□□□ 0.63
TUBB3-211ENST00000556536 CEP135Q66GS9 1140 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 AGMOQ6ZNB7 445 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 CSGALNACT2Q8N6G5 542 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 CCDC94Q9BW85 323 aaPredicted RBP18.96■□□□□ 0.63
TUBB3-211ENST00000556536 CXCL16Q9H2A7 254 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 ELAC1Q9H777 363 aaKnown RBP18.96■□□□□ 0.63
TUBB3-211ENST00000556536 RNF19AQ9NV58 838 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 TMEM161AQ9NX61 479 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 PARP2Q9UGN5 583 aa18.96■□□□□ 0.63
TUBB3-211ENST00000556536 CETN3O15182 167 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 AKAP3O75969 853 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 RECQL4O94761 1208 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 EOMESO95936 686 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 LDHAP00338 332 aaKnown RBP18.95■□□□□ 0.62
TUBB3-211ENST00000556536 ADRB2P07550 413 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 CXCL8P10145 99 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 FGFR1P11362 822 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 KCNJ6P48051 423 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 WNT7BP56706 349 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 SHHQ15465 462 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 ENOX2Q16206 610 aaKnown RBP18.95■□□□□ 0.62
TUBB3-211ENST00000556536 RASIP1Q5U651 963 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 NPAS4Q8IUM7 802 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 ENOX1Q8TC92 643 aaKnown RBP18.95■□□□□ 0.62
TUBB3-211ENST00000556536 PGBD4Q96DM1 585 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 ACAP3Q96P50 834 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 SRRTQ9BXP5 876 aaKnown RBP18.95■□□□□ 0.62
TUBB3-211ENST00000556536 TSPY26PQ9H489 355 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 KLK14Q9P0G3 267 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 PCDHB7Q9Y5E2 793 aa18.95■□□□□ 0.62
TUBB3-211ENST00000556536 PRUNE2Q8WUY3 3088 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 UPP2O95045 317 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 ZNF165P49910 485 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 GATMP50440 423 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 AFF1P51825 1210 aaKnown RBP18.94■□□□□ 0.62
TUBB3-211ENST00000556536 SNRNP35Q16560 246 aaKnown RBP18.94■□□□□ 0.62
TUBB3-211ENST00000556536 KYAT1Q16773 422 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 SLC10A6Q3KNW5 377 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 CLLU1OSQ5K130 101 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 SPATA1Q5VX52 437 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 HACE1Q8IYU2 909 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 AOPEPQ8N6M6 819 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 TOP1MTQ969P6 601 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 BPIFA3Q9BQP9 254 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 NAT10Q9H0A0 1025 aaKnown RBP18.94■□□□□ 0.62
TUBB3-211ENST00000556536 KIAA1586Q9HCI6 787 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 LRFN2Q9ULH4 789 aa18.94■□□□□ 0.62
TUBB3-211ENST00000556536 ZNF233A6NK53 670 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 690.9 ms