RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GOLGA6AQ9NYA3 693 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 MIS18AQ9NYP9 233 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 DBF4Q9UBU7 674 aaPredicted RBP6.04□□□□□ -1.44
SRP54-211ENST00000556445 PARP4Q9UKK3 1724 aaKnown RBP6.04□□□□□ -1.44
SRP54-211ENST00000556445 N4BP2Q86UW6 1770 aaPredicted RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 SCN11AQ9UI33 1791 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 PKD1L3Q7Z443 1732 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 RGS12O14924 1447 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 CCDC66A2RUB6 948 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 GSG1L2A8MUP6 293 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 TCEA3O75764 348 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 EYA4O95677 639 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 DDX58O95786 925 aaKnown RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 GNAI2P04899 355 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 CELA3BP08861 270 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 ENO2P09104 434 aaPredicted RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 PHKG2P15735 406 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 PTPN1P18031 435 aaKnown RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 CASP2P42575 452 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 LACTBP83111 547 aaPredicted RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 KIAA2012Q0VF49 1180 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 KRT24Q2M2I5 525 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 GFOD2Q3B7J2 385 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 ALFQ53S48 1182 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 BTBD8Q5XKL5 378 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 CHD1LQ86WJ1 897 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 ZC3H7AQ8IWR0 971 aaKnown RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 SMAP1Q8IYB5 467 aaPredicted RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 HOOK2Q96ED9 719 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 LCORQ96JN0 433 aaPredicted RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 CDC5LQ99459 802 aaKnown RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 TMEM168Q9H0V1 697 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 TRIM39Q9HCM9 518 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 HYPKQ9NX55 129 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 LUZP4Q9P127 313 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 ZFP69BQ9UJL9 534 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 MAPRE3Q9UPY8 281 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 DAAM1Q9Y4D1 1078 aa6.03□□□□□ -1.44
SRP54-211ENST00000556445 IBTKQ9P2D0 1353 aaPredicted RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 SIPA1L3O60292 1781 aaPredicted RBP6.03□□□□□ -1.44
SRP54-211ENST00000556445 PCDH11XQ9BZA7 1347 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 PCDH11YQ9BZA8 1340 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.02□□□□□ -1.45
SRP54-211ENST00000556445 SLC26A4O43511 780 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 B4GALT3O60512 393 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 RFPL3O75679 317 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 KLHL18O94889 574 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 KNG1P01042 644 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 CYP1A1P04798 512 aaPredicted RBP6.02□□□□□ -1.45
SRP54-211ENST00000556445 KRT15P19012 456 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 DNM2P50570 870 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 ST5P78524 1137 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 DBPQ10586 325 aaPredicted RBP6.02□□□□□ -1.45
SRP54-211ENST00000556445 PABPC4Q13310 644 aaKnown RBP eCLIP6.02□□□□□ -1.45
SRP54-211ENST00000556445 MTMR1Q13613 665 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 CRY1Q16526 586 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 FAM47CQ5HY64 1035 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 ANKRD45Q5TZF3 282 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 PKN3Q6P5Z2 889 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 TRMT10BQ6PF06 316 aaKnown RBP6.02□□□□□ -1.45
SRP54-211ENST00000556445 TOM1L2Q6ZVM7 507 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 BRAPQ7Z569 592 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 NECAB2Q7Z6G3 386 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 FGD2Q7Z6J4 655 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 TTC5Q8N0Z6 440 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 LGI4Q8N135 537 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 DDX17Q92841 729 aaKnown RBP6.02□□□□□ -1.45
SRP54-211ENST00000556445 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 DCTPP1Q9H773 170 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 NCOA5Q9HCD5 579 aaKnown RBP6.02□□□□□ -1.45
SRP54-211ENST00000556445 KCND1Q9NSA2 647 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 INVSQ9Y283 1065 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 ATP23Q9Y6H3 246 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 HEG1Q9ULI3 1381 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 MRC1P22897 1456 aa6.02□□□□□ -1.45
SRP54-211ENST00000556445 AHDC1Q5TGY3 1603 aaPredicted RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 TCRBV16S1A1N1A0A5B0 115 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 KLRG2A4D1S0 409 aaPredicted RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 ERVV-2B6SEH9 535 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 PRRT4C9JH25 899 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 KCNK3O14649 394 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 GSTA4O15217 222 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 RFPL1O75677 317 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 RNASEH2AO75792 299 aaKnown RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 IL18BPO95998 194 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 C4BPAP04003 597 aaKnown RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 CHGBP05060 677 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 UBTFL1P0CB47 393 aaPredicted RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 VDRP11473 427 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 IL2RBP14784 551 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 EIF2S2P20042 333 aaKnown RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 GLRBP48167 497 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 KRTAP10-2P60368 255 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 PLP2Q04941 152 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 SEC23AQ15436 765 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 SMAD2Q15796 467 aaKnown RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 BMP2KLQ5H9B9 411 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 IL31Q6EBC2 164 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 FSTL4Q6MZW2 842 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms