RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 OTOP3Q7RTS5 596 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 PALB2Q86YC2 1186 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 PRSS33Q8NF86 280 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 CMASQ8NFW8 434 aaPredicted RBP24.93■■□□□ 1.58
ACTN1-220ENST00000556433 SNX29Q8TEQ0 813 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 RIN2Q8WYP3 895 aaPredicted RBP24.93■■□□□ 1.58
ACTN1-220ENST00000556433 KIFAP3Q92845 792 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 PRRX2Q99811 253 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 KIFC3Q9BVG8 833 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 RAB34Q9BZG1 259 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 SMOC2Q9H3U7 446 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 DDX19AQ9NUU7 478 aaKnown RBP24.93■■□□□ 1.58
ACTN1-220ENST00000556433 PIEZO1Q92508 2521 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 TDRD15B5MCY1 1934 aaKnown RBP24.92■■□□□ 1.58
ACTN1-220ENST00000556433 PDGFBP01127 241 aaPredicted RBP24.92■■□□□ 1.58
ACTN1-220ENST00000556433 AVPR2P30518 371 aa24.92■■□□□ 1.58
ACTN1-220ENST00000556433 VCPP55072 806 aaKnown RBP24.92■■□□□ 1.58
ACTN1-220ENST00000556433 TUSC3Q13454 348 aa24.92■■□□□ 1.58
ACTN1-220ENST00000556433 EEF1DP3Q658K8 133 aa24.92■■□□□ 1.58
ACTN1-220ENST00000556433 IGSF22Q8N9C0 903 aa24.92■■□□□ 1.58
ACTN1-220ENST00000556433 PAAF1Q9BRP4 392 aa24.92■■□□□ 1.58
ACTN1-220ENST00000556433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.92■■□□□ 1.58
ACTN1-220ENST00000556433 CASTOR2A6NHX0 329 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 RECQL4O94761 1208 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 EDN1P05305 212 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 THP07101 528 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 EFNA5P52803 228 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 RABEP1Q15276 862 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 GPR65Q8IYL9 337 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 FNIP2Q9P278 1114 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 DNM3Q9UQ16 869 aa24.91■■□□□ 1.58
ACTN1-220ENST00000556433 PTGESO14684 152 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 MRE11P49959 708 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 PTPN5P54829 565 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 NT5DC1Q5TFE4 455 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 KRT79Q5XKE5 535 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 CYP26C1Q6V0L0 522 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 GLYCTKQ8IVS8 523 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 HDAC7Q8WUI4 952 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 CXCL16Q9H2A7 254 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 GDAQ9Y2T3 454 aa24.9■■□□□ 1.58
ACTN1-220ENST00000556433 SF3B1O75533 1304 aaKnown RBP eCLIP24.89■■□□□ 1.584e-6■■■■■ 130.8
ACTN1-220ENST00000556433 E9PMD0 336 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 K7ERI5 159 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 LAD1O00515 517 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 TGM5O43548 720 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 RFPL2O75678 378 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 C1RP00736 705 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 RPL17P18621 184 aaKnown RBP24.89■■□□□ 1.58
ACTN1-220ENST00000556433 CREMQ03060 361 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 IL17AQ16552 155 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 DCAF4L1Q3SXM0 396 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 MCTP1Q6DN14 999 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 DTHD1Q6ZMT9 781 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 HASPINQ8TF76 798 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 PLEKHA4Q9H4M7 779 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 KIF3AQ9Y496 699 aa24.89■■□□□ 1.58
ACTN1-220ENST00000556433 CCDC169A6NNP5 214 aa24.88■■□□□ 1.57
ACTN1-220ENST00000556433 PP2D1A8MPX8 630 aa24.88■■□□□ 1.57
ACTN1-220ENST00000556433 ST18O60284 1047 aa24.88■■□□□ 1.57
ACTN1-220ENST00000556433 CDC25AP30304 524 aa24.88■■□□□ 1.57
ACTN1-220ENST00000556433 RTP2Q5QGT7 225 aa24.88■■□□□ 1.57
ACTN1-220ENST00000556433 ATF7IP2Q5U623 682 aa24.88■■□□□ 1.57
ACTN1-220ENST00000556433 LILRA6Q6PI73 481 aa24.88■■□□□ 1.57
ACTN1-220ENST00000556433 PRSS55Q6UWB4 352 aaPredicted RBP24.88■■□□□ 1.57
ACTN1-220ENST00000556433 SMG7Q92540 1137 aaKnown RBP24.88■■□□□ 1.57
ACTN1-220ENST00000556433 RHOBTB2Q9BYZ6 727 aa24.88■■□□□ 1.57
ACTN1-220ENST00000556433 WDR6Q9NNW5 1121 aaKnown RBP24.88■■□□□ 1.57
ACTN1-220ENST00000556433 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.88■■□□□ 1.57
ACTN1-220ENST00000556433 KIF4AO95239 1232 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 PRPHP41219 470 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 PEX3P56589 373 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 TCF15Q12870 199 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 FAM171A1Q5VUB5 890 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 CEP57Q86XR8 500 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 TTPALQ9BTX7 342 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 NT5C3AQ9H0P0 336 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 PIDD1Q9HB75 910 aa24.87■■□□□ 1.57
ACTN1-220ENST00000556433 DAXXQ9UER7 740 aaPredicted RBP24.87■■□□□ 1.57
ACTN1-220ENST00000556433 GBP2P32456 591 aaPredicted RBP24.86■■□□□ 1.57
ACTN1-220ENST00000556433 NPTX2P47972 431 aa24.86■■□□□ 1.57
ACTN1-220ENST00000556433 TDGQ13569 410 aa24.86■■□□□ 1.57
ACTN1-220ENST00000556433 NAB2Q15742 525 aa24.86■■□□□ 1.57
ACTN1-220ENST00000556433 APBB1IPQ7Z5R6 666 aaPredicted RBP24.86■■□□□ 1.57
ACTN1-220ENST00000556433 STAMQ92783 540 aa24.86■■□□□ 1.57
ACTN1-220ENST00000556433 ZNF707Q96C28 371 aaPredicted RBP24.86■■□□□ 1.57
ACTN1-220ENST00000556433 KCNK12Q9HB15 430 aa24.86■■□□□ 1.57
ACTN1-220ENST00000556433 HIP1RO75146 1068 aa24.85■■□□□ 1.57
ACTN1-220ENST00000556433 TMX3Q96JJ7 454 aa24.85■■□□□ 1.57
ACTN1-220ENST00000556433 ZDHHC7Q9NXF8 308 aa24.85■■□□□ 1.57
ACTN1-220ENST00000556433 TNFSF13BQ9Y275 285 aa24.85■■□□□ 1.57
ACTN1-220ENST00000556433 CLUHO75153 1309 aa24.85■■□□□ 1.57
ACTN1-220ENST00000556433 PLXNA3P51805 1871 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 N4BP1O75113 896 aaKnown RBP24.84■■□□□ 1.57
ACTN1-220ENST00000556433 ELAVL2Q12926 359 aaKnown RBP24.84■■□□□ 1.57
ACTN1-220ENST00000556433 ZRSR1Q15695 479 aaKnown RBP24.84■■□□□ 1.57
ACTN1-220ENST00000556433 RILPL1Q5EBL4 403 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 GLRA4Q5JXX5 417 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 RINT1Q6NUQ1 792 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 DAW1Q8N136 415 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms