RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 NR1I2O75469 434 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 TOM1L1O75674 476 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 ALDH2P05091 517 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 BMP1P13497 986 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 LTBRP36941 435 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 GRM5P41594 1212 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 OR1G1P47890 313 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
SLIRP-206ENST00000556375 ADAM15Q13444 863 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 TUSC3Q13454 348 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 BMS1Q14692 1282 aaKnown RBP12.64□□□□□ -0.39
SLIRP-206ENST00000556375 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLIRP-206ENST00000556375 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-206ENST00000556375 EP400NLQ6ZTU2 488 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 RBM23Q86U06 439 aaKnown RBP12.64□□□□□ -0.39
SLIRP-206ENST00000556375 FAM178BQ8IXR5 827 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 VPS52Q8N1B4 723 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 CEP120Q8N960 986 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 ADAMTS19Q8TE59 1207 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 DDX12PQ92771 950 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 CCDC94Q9BW85 323 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-206ENST00000556375 VN1R3Q9BXE9 311 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 ZHX3Q9H4I2 956 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 IGFLR1Q9H665 355 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 TOPORSQ9NS56 1045 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-206ENST00000556375 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 GDAQ9Y2T3 454 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 C2orf71A6NGG8 1288 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 MYMKA6NI61 221 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 HIDE1A8MVS5 230 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 DLL1O00548 723 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 LINC01565O15544 149 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 GLP2RO95838 553 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 PIGRP01833 764 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 THP07101 528 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 CTSAP10619 480 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 ME1P48163 572 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 NDUFV1P49821 464 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 E2F4Q16254 413 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 PUS10Q3MIT2 529 aaKnown RBP12.63□□□□□ -0.39
SLIRP-206ENST00000556375 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 PDILTQ8N807 584 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 MRPL43Q8N983 215 aaKnown RBP12.63□□□□□ -0.39
SLIRP-206ENST00000556375 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-206ENST00000556375 DNAJC19Q96DA6 116 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 BICD1Q96G01 975 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 TCHPQ9BT92 498 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 HERC2P3Q9BVR0 1158 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 TNMDQ9H2S6 317 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 CUEDC2Q9H467 287 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 ST6GALNAC4Q9H4F1 302 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 SEL1LQ9UBV2 794 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 TBX20Q9UMR3 447 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 ZDHHC9Q9Y397 364 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 IRAK3Q9Y616 596 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 MUC3AQ02505 3323 aa12.63□□□□□ -0.39
SLIRP-206ENST00000556375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 HNRNPDLO14979 420 aaKnown RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 PER2O15055 1255 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 EFEMP2O95967 443 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 SOD2P04179 222 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 SRGAP2BP0DMP2 458 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 HARSP12081 509 aaKnown RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 GAP43P17677 238 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 YARSP54577 528 aaKnown RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 GTF2BQ00403 316 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 DLX2Q07687 328 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 MCL1Q07820 350 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 PTPN14Q15678 1187 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 NAB2Q15742 525 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 PTCRAQ6ISU1 281 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 SFR1Q86XK3 245 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 MAP4K3Q8IVH8 894 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 RNF168Q8IYW5 571 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 VN1R2Q8NFZ6 395 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 HVCN1Q96D96 273 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 ZBTB45Q96K62 511 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 MSLNLQ96KJ4 702 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 SNX27Q96L92 541 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-206ENST00000556375 COLEC11Q9BWP8 271 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 PANK2Q9BZ23 570 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 RCOR1Q9UKL0 485 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 PCDHA7Q9UN72 937 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 FAM50BQ9Y247 325 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
SLIRP-206ENST00000556375 VWA8A3KMH1 1905 aa12.61□□□□□ -0.39
SLIRP-206ENST00000556375 FRMD3A2A2Y4 597 aa12.61□□□□□ -0.39
SLIRP-206ENST00000556375 GRXCR2A6NFK2 248 aa12.61□□□□□ -0.39
SLIRP-206ENST00000556375 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
SLIRP-206ENST00000556375 F8W810 466 aa12.61□□□□□ -0.39
SLIRP-206ENST00000556375 CLDN3O15551 220 aa12.61□□□□□ -0.39
SLIRP-206ENST00000556375 URODP06132 367 aa12.61□□□□□ -0.39
SLIRP-206ENST00000556375 NMT1P30419 496 aaKnown RBP12.61□□□□□ -0.39
SLIRP-206ENST00000556375 CA8P35219 290 aa12.61□□□□□ -0.39
SLIRP-206ENST00000556375 LIG4P49917 911 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms