RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 IL1R1P14778 569 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 RGS19P49795 217 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 GFRA1P56159 465 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 FKBP1AP62942 108 aaKnown RBP4.8□□□□□ -1.64
ATXN3-240ENST00000556339 GRIN1Q05586 938 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 RASA3Q14644 834 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 ARHGEF6Q15052 776 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 EPHA10Q5JZY3 1008 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 MFSD14BQ5SR56 506 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 PHF19Q5T6S3 580 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 C15orf52Q6ZUT6 534 aaKnown RBP4.8□□□□□ -1.64
ATXN3-240ENST00000556339 TRMT2AQ8IZ69 625 aaKnown RBP4.8□□□□□ -1.64
ATXN3-240ENST00000556339 TMEM145Q8NBT3 493 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 KREMEN2Q8NCW0 462 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 GIMAP8Q8ND71 665 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-240ENST00000556339 DNERQ8NFT8 737 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 SUCLG2Q96I99 432 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 LRRC37BQ96QE4 947 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 PUS3Q9BZE2 481 aaKnown RBP4.8□□□□□ -1.64
ATXN3-240ENST00000556339 SLITRK6Q9H5Y7 841 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 RBPJLQ9UBG7 517 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 ZNF70Q9UC06 446 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-240ENST00000556339 FZD1Q9UP38 647 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 HDAC5Q9UQL6 1122 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 PPP2R3BQ9Y5P8 575 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 MROH5Q6ZUA9 1318 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 PATE3B3GLJ2 98 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 E9PSI1 815 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 SLC27A2O14975 620 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 ACVRL1P37023 503 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 KIF22Q14807 665 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 SMAD2Q15796 467 aaKnown RBP4.79□□□□□ -1.64
ATXN3-240ENST00000556339 FXNQ16595 210 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 FBXO46Q6PJ61 603 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-240ENST00000556339 ANKRD13AQ8IZ07 590 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 CERS5Q8N5B7 392 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 TDRD7Q8NHU6 1098 aaKnown RBP4.79□□□□□ -1.64
ATXN3-240ENST00000556339 EXOC6Q8TAG9 804 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 PIP4K2CQ8TBX8 421 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 TBC1D22AQ8WUA7 517 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 KCTD13Q8WZ19 329 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 ERO1AQ96HE7 468 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 WNK4Q96J92 1243 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 FAM84BQ96KN1 310 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-240ENST00000556339 LMF1Q96S06 567 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 TGIF2Q9GZN2 237 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 BICC1Q9H694 974 aaKnown RBP4.79□□□□□ -1.64
ATXN3-240ENST00000556339 DLL4Q9NR61 685 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 GNL3LQ9NVN8 582 aaKnown RBP4.79□□□□□ -1.64
ATXN3-240ENST00000556339 ASH2LQ9UBL3 628 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 ADAM29Q9UKF5 820 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 TRIM17Q9Y577 477 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 NUB1Q9Y5A7 615 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 PCDHAC2Q9Y5I4 1007 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 LRRC37AA6NMS7 1700 aa4.79□□□□□ -1.64
ATXN3-240ENST00000556339 FAM205AQ6ZU69 1335 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 COL4A1P02462 1669 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 UNCXA6NJT0 531 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 ARNTLO00327 626 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 CT47B1P0C2W7 299 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-240ENST00000556339 NBPF7P0C2Y1 421 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-240ENST00000556339 ZBTB48P10074 688 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-240ENST00000556339 SLC5A1P13866 664 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 DEKP35659 375 aaKnown RBP4.78□□□□□ -1.64
ATXN3-240ENST00000556339 GLRBP48167 497 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 SP3Q02447 781 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 SLFN5Q08AF3 891 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 PRKD1Q15139 912 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-240ENST00000556339 LRRC24Q50LG9 513 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 CRB2Q5IJ48 1285 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 USP53Q70EK8 1073 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 EEPD1Q7L9B9 569 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 GPR155Q7Z3F1 870 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 TEKT1Q969V4 418 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 MRRFQ96E11 262 aaKnown RBP4.78□□□□□ -1.64
ATXN3-240ENST00000556339 HOOK2Q96ED9 719 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 NUDT11Q96G61 164 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 ZBED3Q96IU2 234 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-240ENST00000556339 GNRHR2Q96P88 292 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 JAM3Q9BX67 310 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 SIL1Q9H173 461 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 MEGF9Q9H1U4 602 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 R3HDMLQ9H3Y0 253 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 SLC6A20Q9NP91 592 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 SMC4Q9NTJ3 1288 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 ZFP69BQ9UJL9 534 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 R3HCC1Q9Y3T6 440 aaKnown RBP4.78□□□□□ -1.64
ATXN3-240ENST00000556339 RIPOR2Q9Y4F9 1068 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 PSME4Q14997 1843 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 PAPPA2Q9BXP8 1791 aa4.78□□□□□ -1.64
ATXN3-240ENST00000556339 MAST3O60307 1309 aa4.77□□□□□ -1.65
ATXN3-240ENST00000556339 PTPRCP08575 1304 aa4.77□□□□□ -1.65
ATXN3-240ENST00000556339 CCL15-CCL14A0A0B4J2E2 113 aa4.77□□□□□ -1.65
ATXN3-240ENST00000556339 PDE8BO95263 885 aa4.77□□□□□ -1.65
ATXN3-240ENST00000556339 UBTFL1P0CB47 393 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-240ENST00000556339 GNAT1P11488 350 aa4.77□□□□□ -1.65
ATXN3-240ENST00000556339 CACNB3P54284 484 aa4.77□□□□□ -1.65
ATXN3-240ENST00000556339 PUM3Q15397 648 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms