RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 UBE3DQ7Z6J8 389 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 TMEM192Q8IY95 271 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 BHLHE22Q8NFJ8 381 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 PPP1R13LQ8WUF5 828 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 NKD1Q969G9 470 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 GPRASP2Q96D09 838 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 PLPPR2Q96GM1 343 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 EAF1Q96JC9 268 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 FAM84AQ96KN4 292 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 CTAGE1Q96RT6 745 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 HAUS7Q99871 368 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 CAPN10Q9HC96 672 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 PRDM7Q9NQW5 492 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 CLDND1Q9NY35 253 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 MUTYHQ9UIF7 546 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 PNMA2Q9UL42 364 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 CCPG1Q9ULG6 757 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 PTPDC1A2A3K4 754 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 ZNF503-AS2A6NEH8 195 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 STXBP3O00186 592 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 GFRA2O00451 464 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 MBTPS2O43462 519 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 RAB11FIP3O75154 756 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 CHGBP05060 677 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 APPP05067 770 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 RB1P06400 928 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 SLC3A2P08195 630 aaKnown RBP5.67□□□□□ -1.5
ATXN3-239ENST00000556315 GNAT2P19087 354 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 CALML3P27482 149 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 SNAP25P60880 206 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 PDE4BQ07343 736 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 COL9A2Q14055 689 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-239ENST00000556315 TCTN1Q2MV58 587 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 ZBTB37Q5TC79 503 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-239ENST00000556315 RNF207Q6ZRF8 634 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 CYFIP1Q7L576 1253 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 REC114Q7Z4M0 266 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 C12orf40Q86WS4 652 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 ZSWIM9Q86XI8 627 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 KSR1Q8IVT5 923 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 ITPRIPQ8IWB1 547 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 FTSJ3Q8IY81 847 aaKnown RBP5.67□□□□□ -1.5
ATXN3-239ENST00000556315 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 DBF4BQ8NFT6 615 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 DNERQ8NFT8 737 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 RASGRP4Q8TDF6 673 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 DHX38Q92620 1227 aaKnown RBP5.67□□□□□ -1.5
ATXN3-239ENST00000556315 KAT2BQ92831 832 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 ATOH1Q92858 354 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-239ENST00000556315 COPS5Q92905 334 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 LMAN2LQ9H0V9 348 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 FAM53CQ9NYF3 392 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 UBP1Q9NZI7 540 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 CHD7Q9P2D1 2997 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 EMSYQ7Z589 1322 aa5.67□□□□□ -1.5
ATXN3-239ENST00000556315 LRRC37A2A6NM11 1700 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 PRAMEF27A3QJZ7 478 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 HMMRO75330 724 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 GH1P01241 217 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 EDNRBP24530 442 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 TDO2P48775 406 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 ZNF165P49910 485 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 CLCN7P51798 805 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 ZXDAP98168 799 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
ATXN3-239ENST00000556315 DGKDQ16760 1214 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 TRIM71Q2Q1W2 868 aaKnown RBP5.66□□□□□ -1.5
ATXN3-239ENST00000556315 SEZ6Q53EL9 994 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 ZNF618Q5T7W0 954 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 CCDC62Q6P9F0 684 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 BTNL9Q6UXG8 535 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 RPAINQ86UA6 219 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 CILP2Q8IUL8 1156 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 SLITRK4Q8IW52 837 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 MYOCDQ8IZQ8 938 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 KCT2Q8NC54 265 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 FBXO27Q8NI29 283 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 AFG1LQ8WV93 481 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 TOP1MTQ969P6 601 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 CHMP4CQ96CF2 233 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 YME1L1Q96TA2 773 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 SLC38A3Q99624 504 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 KATNAL1Q9BW62 490 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 NACAP1Q9BZK3 213 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 RANBP17Q9H2T7 1088 aaKnown RBP5.66□□□□□ -1.5
ATXN3-239ENST00000556315 HDAC6Q9UBN7 1215 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 STX8Q9UNK0 236 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 CTNND2Q9UQB3 1225 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 MYH1P12882 1939 aa5.66□□□□□ -1.5
ATXN3-239ENST00000556315 FOCADQ5VW36 1801 aa5.65□□□□□ -1.5
ATXN3-239ENST00000556315 LRRC10BA6NIK2 292 aa5.65□□□□□ -1.5
ATXN3-239ENST00000556315 RSPH10B2B2RC85 870 aa5.65□□□□□ -1.5
ATXN3-239ENST00000556315 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-239ENST00000556315 PROB1E7EW31 1015 aa5.65□□□□□ -1.5
ATXN3-239ENST00000556315 C5orf67F2Z3F1 127 aa5.65□□□□□ -1.5
ATXN3-239ENST00000556315 NFIBO00712 420 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms