RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 NT5C1B-RDH14C9J2C7 533 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
SLIRP-205ENST00000556310 RECQL4O94761 1208 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 DDHD2O94830 711 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 FAM13AO94988 1023 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 KRT18P05783 430 aaKnown RBP12.67□□□□□ -0.38
SLIRP-205ENST00000556310 MAPTP10636 758 aaKnown RBP12.67□□□□□ -0.38
SLIRP-205ENST00000556310 SCP2P22307 547 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 KCNA5P22460 613 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 AKAP5P24588 427 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 DDIT3P35638 169 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 ERVFC1P60507 584 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 DSC1Q08554 894 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 GRIK3Q13003 919 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 CTC1Q2NKJ3 1217 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 RRAGBQ5VZM2 374 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 CCDC73Q6ZRK6 1079 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 ADGRD2Q7Z7M1 963 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 KCNG4Q8TDN1 519 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 FAM193BQ96PV7 902 aaPredicted RBP12.67□□□□□ -0.38
SLIRP-205ENST00000556310 RPS6KC1Q96S38 1066 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 ACO2Q99798 780 aaKnown RBP12.67□□□□□ -0.38
SLIRP-205ENST00000556310 TCF25Q9BQ70 676 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 PARVGQ9HBI0 331 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 NGRNQ9NPE2 291 aaKnown RBP12.67□□□□□ -0.38
SLIRP-205ENST00000556310 ENTPD7Q9NQZ7 604 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
SLIRP-205ENST00000556310 STK39Q9UEW8 545 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 PCDHGC5Q9Y5F6 944 aa12.67□□□□□ -0.38
SLIRP-205ENST00000556310 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 BRD1O95696 1058 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 STAT6P42226 847 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 STRN3Q13033 797 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 GIT2Q14161 759 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 BECN1Q14457 450 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 ZNF568Q3ZCX4 644 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 PLPP4Q5VZY2 271 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 COLGALT2Q8IYK4 626 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 GSTCDQ8NEC7 633 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 MICAL1Q8TDZ2 1067 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-205ENST00000556310 CDCA3Q99618 268 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-205ENST00000556310 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
SLIRP-205ENST00000556310 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-205ENST00000556310 ZBP1Q9H171 429 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 CDT1Q9H211 546 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 CLDND1Q9NY35 253 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 SNTG2Q9NY99 539 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 KLK14Q9P0G3 267 aa12.66□□□□□ -0.38
SLIRP-205ENST00000556310 A0A087X0B3 334 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 K7ENM7 598 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 ABLIM1O14639 778 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 NRP1O14786 923 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 CUTAO60888 179 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 MCF2P10911 925 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 PROZP22891 400 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 ABCD1P33897 745 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
SLIRP-205ENST00000556310 NRIP1P48552 1158 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 KCNQ1P51787 676 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 SMC1AQ14683 1233 aaKnown RBP12.65□□□□□ -0.38
SLIRP-205ENST00000556310 DUSP6Q16828 381 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-205ENST00000556310 MPZL3Q6UWV2 235 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-205ENST00000556310 ZPBP2Q6X784 338 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 TMC7Q7Z402 723 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 HAUS6Q7Z4H7 955 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
SLIRP-205ENST00000556310 MYCT1Q8N699 235 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 DDX12PQ92771 950 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 TLE6Q9H808 572 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 MIOSQ9NXC5 875 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
SLIRP-205ENST00000556310 PRG3Q9Y2Y8 225 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-205ENST00000556310 TCHHQ07283 1943 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 H3BQ06 376 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-205ENST00000556310 PTGESO14684 152 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 TRAK2O60296 914 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 TBX10O75333 385 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 NR1I2O75469 434 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 TOM1L1O75674 476 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 ALDH2P05091 517 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 BMP1P13497 986 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 LTBRP36941 435 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 GRM5P41594 1212 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 OR1G1P47890 313 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
SLIRP-205ENST00000556310 ADAM15Q13444 863 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 TUSC3Q13454 348 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 BMS1Q14692 1282 aaKnown RBP12.64□□□□□ -0.39
SLIRP-205ENST00000556310 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms