RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 OSTNP61366 133 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-216ENST00000556083 PLEKHA5Q9HAU0 1116 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 MTMR4Q9NYA4 1195 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 PLAAQ9Y263 795 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 RHOBTB3O94955 611 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 EEF1B2P24534 225 aaKnown RBP11.33□□□□□ -0.6
ACTN1-216ENST00000556083 SREBF2Q12772 1141 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 ZKSCAN8Q15776 578 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-216ENST00000556083 TXNRD1Q16881 649 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 Q3C1V9 767 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 EFHC1Q5JVL4 640 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 TRIM59Q8IWR1 403 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 GPRASP2Q96D09 838 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 STAMBPL1Q96FJ0 436 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 FAM84BQ96KN1 310 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-216ENST00000556083 AGPAT1Q99943 283 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 C11orf70Q9BRQ4 267 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 CATSPERBQ9H7T0 1116 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 PPARGC1AQ9UBK2 798 aaKnown RBP11.33□□□□□ -0.6
ACTN1-216ENST00000556083 CNTNAP4Q9C0A0 1308 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 CCDC78A2IDD5 438 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 KPNA6O60684 536 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 E2F6O75461 281 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 KRT14P02533 472 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 FTLP02792 175 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-216ENST00000556083 GFAPP14136 432 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 IL10P22301 178 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 DCAF4L1Q3SXM0 396 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 TNIP2Q8NFZ5 429 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 SLC26A7Q8TE54 656 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 MAML1Q92585 1016 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 OSBPL9Q96SU4 736 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 SMARCAL1Q9NZC9 954 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 MPP6Q9NZW5 540 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 PPP2R3BQ9Y5P8 575 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 NRKQ7Z2Y5 1582 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 CDH16O75309 829 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 CETPP11597 493 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 RGS4P49798 205 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 SLC26A2P50443 739 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 RHPN2Q8IUC4 686 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 SPATA2LQ8IUW3 424 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-216ENST00000556083 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 APBB2Q92870 758 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 PSD3Q9NYI0 1048 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 CD163L1Q9NR16 1453 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 ARFIP2P53365 341 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 SESN3P58005 492 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 IL1RL1Q01638 556 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 CENPCQ03188 943 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 DNAL1Q4LDG9 190 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 FAM102AQ5T9C2 384 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-216ENST00000556083 EEPD1Q7L9B9 569 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 RRM2BQ7LG56 351 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 ZNF280CQ8ND82 737 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 APPL2Q8NEU8 664 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 PIGOQ8TEQ8 1089 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 VCPKMTQ9H867 229 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 OLA1Q9NTK5 396 aaKnown RBP11.32□□□□□ -0.6
ACTN1-216ENST00000556083 PAK5Q9P286 719 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 GDAQ9Y2T3 454 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 GMNCA6NCL1 334 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 E9PMD0 336 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 SORBS3O60504 671 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 ZC3H11AO75152 810 aaKnown RBP eCLIP11.32□□□□□ -0.6
ACTN1-216ENST00000556083 YWHABP31946 246 aaKnown RBP11.32□□□□□ -0.6
ACTN1-216ENST00000556083 CYP27A1Q02318 531 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 MYBPC2Q14324 1141 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 PDK1Q15118 436 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 RSAD1Q9HA92 442 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 ZFP69BQ9UJL9 534 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 BLOC1S6Q9UL45 172 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 NEDD4P46934 1319 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 FAM95CA0A1B0GW59 222 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 POTEMA6NI47 508 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 SUPT3HO75486 399 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 CPB1P15086 417 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 PKP1Q13835 747 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 INPP5AQ14642 412 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 SLC18A3Q16572 532 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 HIBCHQ6NVY1 386 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-216ENST00000556083 NUDCD3Q8IVD9 361 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 NCLNQ969V3 563 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 PAWRQ96IZ0 340 aaKnown RBP11.32□□□□□ -0.6
ACTN1-216ENST00000556083 SENP7Q9BQF6 1050 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 ING2Q9H160 280 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 APEX2Q9UBZ4 518 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-216ENST00000556083 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
ACTN1-216ENST00000556083 UNC13BO14795 1591 aa11.31□□□□□ -0.6
ACTN1-216ENST00000556083 IGSF9BQ9UPX0 1349 aa11.31□□□□□ -0.6
ACTN1-216ENST00000556083 C16orf96A6NNT2 1141 aa11.31□□□□□ -0.6
ACTN1-216ENST00000556083 CREB3O43889 395 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms