RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 BEND7Q8N7W2 519 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 XXYLT1Q8NBI6 393 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 FGD4Q96M96 766 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 FBXL18Q96ME1 805 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 CEP89Q96ST8 783 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 MMP19Q99542 508 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 CRACR2AQ9BSW2 395 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 STK33Q9BYT3 514 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 DHX33Q9H6R0 707 aaKnown RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 ATP6V0A4Q9HBG4 840 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 SIX2Q9NPC8 291 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 LUC7LQ9NQ29 371 aaKnown RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 XPNPEP1Q9NQW7 623 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 ZNF302Q9NR11 478 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 NRBP2Q9NSY0 501 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 DDX41Q9UJV9 622 aaKnown RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 CDC23Q9UJX2 597 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 PCDHA13Q9Y5I0 950 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 MRFAP1Q9Y605 127 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 PTPRFP10586 1907 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 ATP8B3O60423 1300 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 A0A0U1RQJ8 604 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 TMEM150BA6NC51 233 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 ASB14A6NK59 587 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 EFCAB8A8MWE9 144 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 ZNF263O14978 683 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 KIAA0391O15091 583 aaKnown RBP9.02□□□□□ -0.97
ATXN3-235ENST00000556082 SLC16A4O15374 487 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 AKR1B10O60218 316 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 LGR5O75473 907 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 KRT13P13646 458 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 SLC9A1P19634 815 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 GARTP22102 1010 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 GTF2H1P32780 548 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 SOX11P35716 441 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 ARL2P36404 184 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 MAP2K3P46734 347 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 GCLCP48506 637 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-235ENST00000556082 CYP2J2P51589 502 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 CCNA1P78396 465 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 CETN1Q12798 172 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 BFSP1Q12934 665 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 ASIC2Q16515 512 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 MAP7D1Q3KQU3 841 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 EAPPQ56P03 285 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-235ENST00000556082 DCAF17Q5H9S7 520 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-235ENST00000556082 CELF3Q5SZQ8 465 aaKnown RBP9.02□□□□□ -0.97
ATXN3-235ENST00000556082 CCDC122Q5T0U0 273 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 FAM160B1Q5W0V3 765 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 PAPD7Q5XG87 772 aaKnown RBP9.02□□□□□ -0.97
ATXN3-235ENST00000556082 TMEM214Q6NUQ4 689 aaKnown RBP9.02□□□□□ -0.97
ATXN3-235ENST00000556082 CCDC62Q6P9F0 684 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 MAEAQ7L5Y9 396 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 PLPPR4Q7Z2D5 763 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 ANKRD23Q86SG2 305 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 KSR1Q8IVT5 923 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 GPRC5AQ8NFJ5 357 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 ATRIPQ8WXE1 791 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 JAKMIP2Q96AA8 810 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 FAM167AQ96KS9 214 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 IFT74Q96LB3 600 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 PCYT2Q99447 389 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 NAPGQ99747 312 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-235ENST00000556082 PAGR1Q9BTK6 254 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 LACRTQ9GZZ8 138 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 PORCNQ9H237 461 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 KIAA1586Q9HCI6 787 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 GPRC5CQ9NQ84 441 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 KMT5AQ9NQR1 393 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 HSPBP1Q9NZL4 362 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 ARHGAP28Q9P2N2 729 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 MORF4L1Q9UBU8 362 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 DOLKQ9UPQ8 538 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 OTOFQ9HC10 1997 aa9.02□□□□□ -0.97
ATXN3-235ENST00000556082 ANO9A1A5B4 782 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 DENND3A2RUS2 1198 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 CCDC169A6NNP5 214 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 BTNL10A8MVZ5 291 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 GPR25O00155 361 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 STRNO43815 780 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 GAS2O43903 313 aaKnown RBP9.01□□□□□ -0.97
ATXN3-235ENST00000556082 PEX10O60683 326 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 TADA3O75528 432 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 ABL1P00519 1130 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 PIGRP01833 764 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 PLEKP08567 350 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-235ENST00000556082 CCDC172P0C7W6 258 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 PRLRP16471 622 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 FERP16591 822 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 CNGA1P29973 690 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 ADSSP30520 456 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 MAGEA1P43355 309 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 NAMPTP43490 491 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 SLC26A2P50443 739 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 STAT5BP51692 787 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 VAMP7P51809 220 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 NCBP1Q09161 790 aaKnown RBP9.01□□□□□ -0.97
ATXN3-235ENST00000556082 KLHL30Q0D2K2 578 aa9.01□□□□□ -0.97
ATXN3-235ENST00000556082 SLC18A3Q16572 532 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms