RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 STYXL1Q9Y6J8 313 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 TRIP11Q15643 1979 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 ARHGEF35A5YM69 484 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 TRIM66O15016 1216 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 ITGB1P05556 798 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 SKIP12755 728 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 PLS3P13797 630 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 AFF1P51825 1210 aaKnown RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 UBE3AQ05086 875 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 GNL2Q13823 731 aaKnown RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 KARSQ15046 597 aaKnown RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 CT47A1Q5JQC4 288 aaPredicted RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 TEX35Q5T0J7 233 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 SLC39A4Q6P5W5 647 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM184AQ6ZMB5 413 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 KRBA2Q6ZNG9 492 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 KRI1Q8N9T8 703 aaKnown RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 GDPD5Q8WTR4 605 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 NLRP4Q96MN2 994 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 ACO2Q99798 780 aaKnown RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 REEP2Q9BRK0 252 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 C2orf40Q9H1Z8 148 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 PRMT7Q9NVM4 692 aaPredicted RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 PLAGL2Q9UPG8 496 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 CEP83Q9Y592 693 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 PCDHB7Q9Y5E2 793 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 MTCL1Q9Y4B5 1905 aaKnown RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 NPHP3-ACAD11A0A0J9YXS1 232 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 DENND3A2RUS2 1198 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 HOXA2O43364 376 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 CCDC172P0C7W6 258 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 SRGAP2CP0DJJ0 459 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 EFNA5P52803 228 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 GTF2BQ00403 316 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 CEP135Q66GS9 1140 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 SLC27A1Q6PCB7 646 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 EP400NLQ6ZTU2 488 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 EPM2AIP1Q7L775 607 aaPredicted RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 COLGALT2Q8IYK4 626 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 SLC39A11Q8N1S5 342 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 LRRC43Q8N309 656 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 FIBCD1Q8N539 461 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM87AQ8NBN3 555 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 NEK11Q8NG66 645 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 MAFAQ8NHW3 353 aaPredicted RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 KCNV2Q8TDN2 545 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 CPB2Q96IY4 423 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 YME1L1Q96TA2 773 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 TYW1Q9NV66 732 aaKnown RBP4.29□□□□□ -1.72
LINC00648-202ENST00000555985 TBC1D13Q9NVG8 400 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 MARCH5Q9NX47 278 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 MIOSQ9NXC5 875 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 LCMT1Q9UIC8 334 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 PCDHA7Q9UN72 937 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 TNFSF13BQ9Y275 285 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 JRKLQ9Y4A0 524 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 FHOD1Q9Y613 1164 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 IRAK3Q9Y616 596 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 CITO14578 2027 aa4.29□□□□□ -1.72
LINC00648-202ENST00000555985 MYMKA6NI61 221 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 PTGESO14684 152 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 SPTLC2O15270 562 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 GRM6O15303 877 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 ACTN4O43707 911 aaKnown RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 MARCH6O60337 910 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 CUTAO60888 179 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 DDHD2O94830 711 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 FOSL2P15408 326 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 H2AFXP16104 143 aaPredicted RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 MARCKSP29966 332 aaPredicted RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 HOXD13P35453 343 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 LTBRP36941 435 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 PLA2G4AP47712 749 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 MCL1Q07820 350 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 NFX1Q12986 1120 aaKnown RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 MCM6Q14566 821 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 PPP2R5AQ15172 486 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 ELF2Q15723 593 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 EEF1DP3Q658K8 133 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 NOTUMQ6P988 496 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 TRMT1LQ7Z2T5 733 aaKnown RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM173Q86WV6 379 aaPredicted RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 GPR65Q8IYL9 337 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 GOLGA6L1Q8N7Z2 621 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 CNNM3Q8NE01 707 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 LARP4BQ92615 738 aaKnown RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 LPPQ93052 612 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 MSLNLQ96KJ4 702 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 DRC1Q96MC2 740 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 FAM161BQ96MY7 647 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 PPP1R10Q96QC0 940 aaKnown RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM175Q9BSA9 504 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 KIFC3Q9BVG8 833 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 NXF3Q9H4D5 531 aaKnown RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 NRDE2Q9H7Z3 1164 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 UBN1Q9NPG3 1134 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 OLFML3Q9NRN5 406 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 PIN4Q9Y237 131 aaKnown RBP4.28□□□□□ -1.72
LINC00648-202ENST00000555985 GIT1Q9Y2X7 761 aa4.28□□□□□ -1.72
LINC00648-202ENST00000555985 ARL5CA6NH57 179 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms