RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 EPB41P11171 864 aaKnown RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 ITGA4P13612 1032 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 ACOT2P49753 483 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 MCCD1P59942 119 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 ENPEPQ07075 957 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 SURF1Q15526 300 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 SNRNP35Q16560 246 aaKnown RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 TCTN1Q2MV58 587 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 CEP135Q66GS9 1140 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 CRELD2Q6UXH1 353 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 FRMD5Q7Z6J6 570 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 USP37Q86T82 979 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 ZNF598Q86UK7 904 aaKnown RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 FAM114A1Q8IWE2 563 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 LINC01599Q8WXQ3 324 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 SAAL1Q96ER3 474 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 MFSD14AQ96MC6 490 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 TSPAN18Q96SJ8 248 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 MTIF3Q9H2K0 278 aaKnown RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 RPF1Q9H9Y2 349 aaKnown RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 CBX8Q9HC52 389 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 TOPORSQ9NS56 1045 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-221ENST00000555773 TMEM161AQ9NX61 479 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 SNTG2Q9NY99 539 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 GIT1Q9Y2X7 761 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 PCDHB7Q9Y5E2 793 aa13.57□□□□□ -0.24
SHMT2-221ENST00000555773 GOLGA8IPA6NC78 632 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 GOLGA8JA6NMD2 632 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 HOXA2O43364 376 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 CAPN15O75808 1086 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 IL18RAPO95256 599 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 AMHP03971 560 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 ADRB2P07550 413 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 CASP4P49662 377 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 MARSP56192 900 aaKnown RBP13.56□□□□□ -0.24
SHMT2-221ENST00000555773 OSTNP61366 133 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 TPM4P67936 248 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 NCAPHQ15003 741 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
SHMT2-221ENST00000555773 CBWD2Q8IUF1 395 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 NPAS4Q8IUM7 802 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
SHMT2-221ENST00000555773 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 AOPEPQ8N6M6 819 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 CEP120Q8N960 986 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 HERVK_113Q902F9 699 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 NXF3Q9H4D5 531 aaKnown RBP13.56□□□□□ -0.24
SHMT2-221ENST00000555773 ASB7Q9H672 318 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 FANCLQ9NW38 375 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 PARP2Q9UGN5 583 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 LRFN2Q9ULH4 789 aa13.56□□□□□ -0.24
SHMT2-221ENST00000555773 GOLGA6L19H0YKK7 550 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 KRT13P13646 458 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-221ENST00000555773 MAGEA10P43363 369 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-221ENST00000555773 KCNJ6P48051 423 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 EPHB4P54760 987 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 SPAG1Q07617 926 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 PSMD6Q15008 389 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 ENOX2Q16206 610 aaKnown RBP13.55□□□□□ -0.24
SHMT2-221ENST00000555773 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 XKR4Q5GH76 650 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 ZBTB41Q5SVQ8 909 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 ALKAL1Q6UXT8 129 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 OTOP2Q7RTS6 562 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 BRSK2Q8IWQ3 736 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 CRIPAKQ8N1N5 446 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 TOP1MTQ969P6 601 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 EEF2KMTQ96G04 330 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 BORCS6Q96GS4 357 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.55□□□□□ -0.243e-9■□□□□ 10
SHMT2-221ENST00000555773 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 RBAKQ9NYW8 714 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-221ENST00000555773 MAGEC2Q9UBF1 373 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-221ENST00000555773 ARMCX3Q9UH62 379 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-221ENST00000555773 HES2Q9Y543 173 aa13.55□□□□□ -0.24
SHMT2-221ENST00000555773 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-221ENST00000555773 TTC26A0AVF1 554 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 LRRC10BA6NIK2 292 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 INPPL1O15357 1258 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 RECQL4O94761 1208 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 ATF7P17544 494 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-221ENST00000555773 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
SHMT2-221ENST00000555773 AKAP5P24588 427 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 EEF1GP26641 437 aaKnown RBP13.54□□□□□ -0.24
SHMT2-221ENST00000555773 TNFSF9P41273 254 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 WDR5P61964 334 aaKnown RBP13.54□□□□□ -0.24
SHMT2-221ENST00000555773 PPP2R3AQ06190 1150 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 CYP24A1Q07973 514 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 CCDC40Q4G0X9 1142 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 CDKAL1Q5VV42 579 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 GLB1LQ6UWU2 654 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.54□□□□□ -0.244e-7■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms