RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 DNAJB4Q9UDY4 337 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 STK39Q9UEW8 545 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 FAM50BQ9Y247 325 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 GIT1Q9Y2X7 761 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 HES2Q9Y543 173 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 MYO7AQ13402 2215 aa10.58□□□□□ -0.72
ACTN1-215ENST00000555616 HIDE1A8MVS5 230 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 NT5C1B-RDH14C9J2C7 533 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 HIP1RO75146 1068 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 DDHD2O94830 711 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 SMC2O95347 1197 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 NPTXRO95502 500 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 SSBP05455 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 PLA2G4BP0C869 781 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 IL9P15248 144 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 AFMP43652 599 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 NPTX2P47972 431 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 NDUFV1P49821 464 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 SLC12A3P55017 1021 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 COASYQ13057 564 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 DMP1Q13316 513 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 SMAD4Q13485 552 aaKnown RBP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 KCNC3Q14003 757 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 SMC1AQ14683 1233 aaKnown RBP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 EP400NLQ6ZTU2 488 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 DDX53Q86TM3 631 aaKnown RBP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 CDR2LQ86X02 465 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 FAM178BQ8IXR5 827 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 MRPL43Q8N983 215 aaKnown RBP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 SYT2Q8N9I0 419 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-215ENST00000555616 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 GSTCDQ8NEC7 633 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 VN1R2Q8NFZ6 395 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 PAGE5Q96GU1 130 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 ZFP42Q96MM3 310 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 GAD1Q99259 594 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 VN1R3Q9BXE9 311 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 GBP3Q9H0R5 595 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 ZBP1Q9H171 429 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 C17orf75Q9HAS0 396 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 BLOC1S4Q9NUP1 217 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 KBTBD4Q9NVX7 518 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 KCND2Q9NZV8 630 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 ARHGAP28Q9P2N2 729 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 CD207Q9UJ71 328 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 IRAK3Q9Y616 596 aa10.57□□□□□ -0.72
ACTN1-215ENST00000555616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-215ENST00000555616 C2orf71A6NGG8 1288 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 PER2O15055 1255 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 MBTPS2O43462 519 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 POMCP01189 267 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 KRT18P05783 430 aaKnown RBP10.56□□□□□ -0.72
ACTN1-215ENST00000555616 SCNN1GP51170 649 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 PEX3P56589 373 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 GRIK3Q13003 919 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 DHX8Q14562 1220 aaKnown RBP10.56□□□□□ -0.72
ACTN1-215ENST00000555616 MCM6Q14566 821 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 SMAD2Q15796 467 aaKnown RBP10.56□□□□□ -0.72
ACTN1-215ENST00000555616 ZSCAN23Q3MJ62 389 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 DCAF4L1Q3SXM0 396 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 EEF1DP3Q658K8 133 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 TMEM184AQ6ZMB5 413 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 TMC7Q7Z402 723 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 GPBP1Q86WP2 473 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 COLGALT2Q8IYK4 626 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 VPS52Q8N1B4 723 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
ACTN1-215ENST00000555616 APOL6Q9BWW8 343 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 GZF1Q9H116 711 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-215ENST00000555616 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 MARCH5Q9NX47 278 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 PRKAG3Q9UGI9 489 aa10.56□□□□□ -0.72
ACTN1-215ENST00000555616 BARX2Q9UMQ3 279 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-215ENST00000555616 ARIH1Q9Y4X5 557 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-215ENST00000555616 RECQL4O94761 1208 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 EFEMP2O95967 443 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 SRGAP2BP0DMP2 458 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 CTSAP10619 480 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 PLS3P13797 630 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 AKAP5P24588 427 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 RBM10P98175 930 aaKnown RBP10.55□□□□□ -0.72
ACTN1-215ENST00000555616 ZP2Q05996 745 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 PNOCQ13519 176 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 GIT2Q14161 759 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 GSE1Q14687 1217 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 PTPN14Q15678 1187 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 CLUL1Q15846 466 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 NT5DC1Q5TFE4 455 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 ATF7IP2Q5U623 682 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 SASS6Q6UVJ0 657 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 RBM43Q6ZSC3 357 aaKnown RBP10.55□□□□□ -0.72
ACTN1-215ENST00000555616 TAS1R3Q7RTX0 852 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 GRAMD1CQ8IYS0 662 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 RNF168Q8IYW5 571 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-215ENST00000555616 LRRC15Q8TF66 581 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 STAMQ92783 540 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 KCNN1Q92952 543 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 SMARCE1Q969G3 411 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms