RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 DNAJC8O75937 253 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-209ENST00000555609 ECEL1O95672 775 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 MYBL1P10243 752 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 CHN1P15882 459 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 ITIH2P19823 946 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 YWHABP31946 246 aaKnown RBP17.35■□□□□ 0.37
TUBB3-209ENST00000555609 MNAT1P51948 309 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 PSMC5P62195 406 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 CALCOCO2Q13137 446 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 SIX1Q15475 284 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-209ENST00000555609 SPDYE2Q495Y8 402 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 TTC27Q6P3X3 843 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 RSBN1LQ6PCB5 846 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-209ENST00000555609 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 MAGEC3Q8TD91 643 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 ATXN2LQ8WWM7 1075 aaKnown RBP17.35■□□□□ 0.37
TUBB3-209ENST00000555609 DHX38Q92620 1227 aaKnown RBP17.35■□□□□ 0.37
TUBB3-209ENST00000555609 NT5C1BQ96P26 610 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 OSBPL7Q9BZF2 842 aa17.35■□□□□ 0.37
TUBB3-209ENST00000555609 AVENQ9NQS1 362 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-209ENST00000555609 TMEM110-MUSTN1A8MSY1 372 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 RASGRF2O14827 1237 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 CHUKO15111 745 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 MMEP08473 750 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 CYP11B1P15538 503 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 COPB2P35606 906 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 SLC1A1P43005 524 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 MAP3K10Q02779 954 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
TUBB3-209ENST00000555609 DLGAP5Q15398 846 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 CCDC91Q7Z6B0 441 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 PIGWQ7Z7B1 504 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 FAM83AQ86UY5 434 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 ZNF677Q86XU0 584 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 MAP4K3Q8IVH8 894 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 PLEKHO2Q8TD55 490 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 HELQQ8TDG4 1101 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 PARD3BQ8TEW8 1205 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 GRK7Q8WTQ7 553 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 SPIRE2Q8WWL2 714 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 CCT6BQ92526 530 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 ZNF653Q96CK0 615 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 MFSD14AQ96MC6 490 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 FBXL18Q96ME1 805 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 AZI2Q9H6S1 392 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 HOMER3Q9NSC5 361 aa17.34■□□□□ 0.37
TUBB3-209ENST00000555609 INTS9Q9NV88 658 aaKnown RBP17.34■□□□□ 0.37
TUBB3-209ENST00000555609 CYP26A1O43174 497 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 ASNSP08243 561 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 RARAP10276 462 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 SNRNP35Q16560 246 aaKnown RBP17.33■□□□□ 0.37
TUBB3-209ENST00000555609 ZNF568Q3ZCX4 644 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 XRRA1Q6P2D8 792 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.37
TUBB3-209ENST00000555609 MIGA2Q7L4E1 593 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 PPM1KQ8N3J5 372 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 FBXL13Q8NEE6 735 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 CLEC4DQ8WXI8 215 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 SERPINB12Q96P63 405 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 NTPCRQ9BSD7 190 aaKnown RBP17.33■□□□□ 0.37
TUBB3-209ENST00000555609 ADAM7Q9H2U9 754 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 SEMA4AQ9H3S1 761 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 GINM1Q9NU53 330 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 TBX20Q9UMR3 447 aa17.33■□□□□ 0.37
TUBB3-209ENST00000555609 CNTNAP1P78357 1384 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 CCT8L1PA6NM43 557 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 DDX39AO00148 427 aaKnown RBP17.33■□□□□ 0.36
TUBB3-209ENST00000555609 DKC1O60832 514 aaKnown RBP eCLIP17.33■□□□□ 0.36
TUBB3-209ENST00000555609 MARCKSL1P49006 195 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 KRT76Q01546 638 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 XRCC4Q13426 336 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 RNF207Q6ZRF8 634 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 ZDHHC14Q8IZN3 488 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 MTMR14Q8NCE2 650 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 PSPC1Q8WXF1 523 aaKnown RBP17.33■□□□□ 0.36
TUBB3-209ENST00000555609 LPAR1Q92633 364 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 SLC40A1Q9NP59 571 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 TCEAL9Q9UHQ7 104 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 KCNG1Q9UIX4 513 aa17.33■□□□□ 0.36
TUBB3-209ENST00000555609 PHF20L1A8MW92 1017 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 WDR64B1ANS9 1081 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 WDR46O15213 610 aaKnown RBP17.32■□□□□ 0.36
TUBB3-209ENST00000555609 ADRB2P07550 413 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 SCTRP47872 440 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 PEX3P56589 373 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 GCNT1Q02742 428 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 PTP4A2Q12974 167 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 MTMR1Q13613 665 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 CLEC16AQ2KHT3 1053 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 ZNF746Q6NUN9 644 aaPredicted RBP17.32■□□□□ 0.36
TUBB3-209ENST00000555609 PPP1R2P3Q6NXS1 205 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 AADACL2Q6P093 401 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 CEP128Q6ZU80 1094 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 MAEAQ7L5Y9 396 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 SLC47A2Q86VL8 602 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 SELENOSQ9BQE4 189 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 RAB20Q9NX57 234 aa17.32■□□□□ 0.36
TUBB3-209ENST00000555609 SMCHD1A6NHR9 2005 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-209ENST00000555609 TLDC2A0PJX2 215 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms