RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
TDP1-212ENST00000555565 NUMBLQ9Y6R0 609 aa12.02□□□□□ -0.49
TDP1-212ENST00000555565 A0A087WWV3 80 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 KANSL1LA0AUZ9 987 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 PRR5-ARHGAP8B1AHC4 643 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 C2CD2LO14523 706 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 SOD2P04179 222 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 SPATA31D3P0C874 917 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 RFX1P22670 979 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 RARRES1P49788 294 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 PTENP60484 403 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 ARHGAP8P85298 464 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 RNASELQ05823 741 aaKnown RBP12.01□□□□□ -0.49
TDP1-212ENST00000555565 MXD4Q14582 209 aaPredicted RBP12.01□□□□□ -0.49
TDP1-212ENST00000555565 LILRA6Q6PI73 481 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 SPATA31D4Q6ZUB0 917 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 CCDC83Q8IWF9 413 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 PIGOQ8TEQ8 1089 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 SMG7Q92540 1137 aaKnown RBP12.01□□□□□ -0.49
TDP1-212ENST00000555565 FGF14Q92915 247 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 TMEM175Q9BSA9 504 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 RTKNQ9BST9 563 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 NCDNQ9UBB6 729 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 FAN1Q9Y2M0 1017 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 PCDHGA2Q9Y5H1 932 aa12.01□□□□□ -0.49
TDP1-212ENST00000555565 TSPAN1O60635 241 aa12□□□□□ -0.49
TDP1-212ENST00000555565 DGAT1O75907 488 aa12□□□□□ -0.49
TDP1-212ENST00000555565 ERLIN2O94905 339 aa12□□□□□ -0.49
TDP1-212ENST00000555565 GLUD1P00367 558 aa12□□□□□ -0.49
TDP1-212ENST00000555565 C1RP00736 705 aa12□□□□□ -0.49
TDP1-212ENST00000555565 SPATA31C1P0DKV0 1188 aa12□□□□□ -0.49
TDP1-212ENST00000555565 NCLP19338 710 aaKnown RBP12□□□□□ -0.49
TDP1-212ENST00000555565 ATP2B1P20020 1258 aa12□□□□□ -0.49
TDP1-212ENST00000555565 MCM7P33993 719 aa12□□□□□ -0.49
TDP1-212ENST00000555565 ARL2P36404 184 aa12□□□□□ -0.49
TDP1-212ENST00000555565 LMNB2Q03252 620 aa12□□□□□ -0.49
TDP1-212ENST00000555565 POU5F1BQ06416 359 aa12□□□□□ -0.49
TDP1-212ENST00000555565 FZD5Q13467 585 aa12□□□□□ -0.49
TDP1-212ENST00000555565 SNW1Q13573 536 aaKnown RBP12□□□□□ -0.49
TDP1-212ENST00000555565 CAPSQ13938 189 aa12□□□□□ -0.49
TDP1-212ENST00000555565 AMHR2Q16671 573 aa12□□□□□ -0.49
TDP1-212ENST00000555565 PARM1Q6UWI2 310 aa12□□□□□ -0.49
TDP1-212ENST00000555565 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
TDP1-212ENST00000555565 SMG8Q8ND04 991 aaKnown RBP12□□□□□ -0.49
TDP1-212ENST00000555565 ASAP3Q8TDY4 903 aa12□□□□□ -0.49
TDP1-212ENST00000555565 HDAC7Q8WUI4 952 aa12□□□□□ -0.49
TDP1-212ENST00000555565 KIF2CQ99661 725 aa12□□□□□ -0.49
TDP1-212ENST00000555565 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
TDP1-212ENST00000555565 HERC2P3Q9BVR0 1158 aa12□□□□□ -0.49
TDP1-212ENST00000555565 EIF2AQ9BY44 585 aaKnown RBP12□□□□□ -0.49
TDP1-212ENST00000555565 RSAD1Q9HA92 442 aa12□□□□□ -0.49
TDP1-212ENST00000555565 CHST7Q9NS84 486 aa12□□□□□ -0.49
TDP1-212ENST00000555565 CNTNAP2Q9UHC6 1331 aa12□□□□□ -0.49
TDP1-212ENST00000555565 SHISA7A6NL88 538 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 F8W810 466 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 INO80B-WBP1J3KQ70 363 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 TGM5O43548 720 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 POMCP01189 267 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 ADH1AP07327 375 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 XRCC6P12956 609 aaKnown RBP eCLIP11.99□□□□□ -0.49
TDP1-212ENST00000555565 GLRA2P23416 452 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 AXLP30530 894 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 DSG1Q02413 1049 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 CSTF1Q05048 431 aaKnown RBP11.99□□□□□ -0.49
TDP1-212ENST00000555565 MBTD1Q05BQ5 628 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 TFDP1Q14186 410 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 PCBP1Q15365 356 aaKnown RBP eCLIP11.99□□□□□ -0.49
TDP1-212ENST00000555565 SAFBQ15424 915 aaKnown RBP eCLIP11.99□□□□□ -0.49
TDP1-212ENST00000555565 CATSPER3Q86XQ3 398 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 COLGALT2Q8IYK4 626 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 URGCPQ8TCY9 931 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 CLDN23Q96B33 292 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 SHDQ96IW2 340 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 CPB2Q96IY4 423 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 C8orf76Q96K31 380 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 OSBPL6Q9BZF3 934 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 PRKD2Q9BZL6 878 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 SPATA6Q9NWH7 488 aaPredicted RBP11.99□□□□□ -0.49
TDP1-212ENST00000555565 ZSCAN32Q9NX65 697 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 RALYQ9UKM9 306 aaKnown RBP11.99□□□□□ -0.49
TDP1-212ENST00000555565 CDV3Q9UKY7 258 aaKnown RBP11.99□□□□□ -0.49
TDP1-212ENST00000555565 SMG5Q9UPR3 1016 aaKnown RBP11.99□□□□□ -0.49
TDP1-212ENST00000555565 HES2Q9Y543 173 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 IPPQ9Y573 584 aa11.99□□□□□ -0.49
TDP1-212ENST00000555565 BAHCC1Q9P281 2608 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 PATJQ8NI35 1801 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 FAM170BA6NMN3 283 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 B4GALT5O43286 388 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 LAMTOR5O43504 91 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 USO1O60763 962 aaKnown RBP11.98□□□□□ -0.49
TDP1-212ENST00000555565 MED24O75448 989 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 URODP06132 367 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 ITGA4P13612 1032 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 ARF4P18085 180 aaPredicted RBP11.98□□□□□ -0.49
TDP1-212ENST00000555565 CD72P21854 359 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 ZNF174Q15697 407 aa11.98□□□□□ -0.49
TDP1-212ENST00000555565 SLC44A4Q53GD3 710 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms