RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 KIAA1586Q9HCI6 787 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 RBAKQ9NYW8 714 aaPredicted RBP11.09□□□□□ -0.63
SRP54-208ENST00000555557 ST3GAL5Q9UNP4 418 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 A0A1W2PQC6 194 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
SRP54-208ENST00000555557 KIAA0391O15091 583 aaKnown RBP11.09□□□□□ -0.63
SRP54-208ENST00000555557 LRRN2O75325 713 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 RPS6KA5O75582 802 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 NPTXRO95502 500 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 GHRP10912 638 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 FMO5P49326 533 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 RBL2Q08999 1139 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 NCBP1Q09161 790 aaKnown RBP11.09□□□□□ -0.63
SRP54-208ENST00000555557 SLC39A5Q6ZMH5 540 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
SRP54-208ENST00000555557 ERGIC2Q96RQ1 377 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 CPSF3Q9UKF6 684 aaKnown RBP11.09□□□□□ -0.63
SRP54-208ENST00000555557 SIK3Q9Y2K2 1263 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 HES2Q9Y543 173 aa11.09□□□□□ -0.63
SRP54-208ENST00000555557 KIAA0100Q14667 2235 aaKnown RBP11.08□□□□□ -0.64
SRP54-208ENST00000555557 EPHB6O15197 1021 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 STAG3L1P0CL83 205 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 MCF2P10911 925 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 SLC9A1P19634 815 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 CD52P31358 61 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 ADKP55263 362 aaKnown RBP11.08□□□□□ -0.64
SRP54-208ENST00000555557 PPP2R3AQ06190 1150 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 TBX2Q13207 712 aaPredicted RBP11.08□□□□□ -0.64
SRP54-208ENST00000555557 PSMD6Q15008 389 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 FBXO47Q5MNV8 452 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 NOTUMQ6P988 496 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 TRAF7Q6Q0C0 670 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 FNBP1Q96RU3 617 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 ADPGKQ9BRR6 497 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
SRP54-208ENST00000555557 PTPRJQ12913 1337 aa11.08□□□□□ -0.64
SRP54-208ENST00000555557 MEFVO15553 781 aaPredicted RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 CD4P01730 458 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 GYPCP04921 128 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 CXCL8P10145 99 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 COL6A1P12109 1028 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 ACTN1P12814 892 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 TNNI1P19237 187 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 CASP14P31944 242 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 LPIN1Q14693 890 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 PCBP1Q15365 356 aaKnown RBP eCLIP11.07□□□□□ -0.648e-10■■□□□ 11.9
SRP54-208ENST00000555557 ENOX2Q16206 610 aaKnown RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 TRIM60Q495X7 471 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 SLC27A1Q6PCB7 646 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 BRSK2Q8IWQ3 736 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 TMC2Q8TDI7 906 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 PAWRQ96IZ0 340 aaKnown RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 TMEM117Q9H0C3 514 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.07□□□□□ -0.641e-8■■■■■ 51.2
SRP54-208ENST00000555557 IMPACTQ9P2X3 320 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 PADI3Q9ULW8 664 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 ITIH6Q6UXX5 1313 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 GOLGA6L6A8MZA4 724 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 RPLP2P05387 115 aaKnown RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 AXLP30530 894 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
SRP54-208ENST00000555557 MBTPS1Q14703 1052 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 EXOC3L4Q17RC7 722 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 FAM26DQ5JW98 314 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 UBXN11Q5T124 520 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 SCARA3Q6AZY7 606 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 TWF2Q6IBS0 349 aaKnown RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 TMEM130Q8N3G9 435 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 ELMO3Q96BJ8 720 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 APOL6Q9BWW8 343 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 LSM14BQ9BX40 385 aaKnown RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 TRIM6Q9C030 488 aaPredicted RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 CXCL16Q9H2A7 254 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 NXF3Q9H4D5 531 aaKnown RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 RPF1Q9H9Y2 349 aaKnown RBP11.07□□□□□ -0.64
SRP54-208ENST00000555557 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 SNTG2Q9NY99 539 aa11.07□□□□□ -0.64
SRP54-208ENST00000555557 UMODL1Q5DID0 1318 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 TTC26A0AVF1 554 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 GPR182O15218 404 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 CLTAP09496 248 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 TRIM21P19474 475 aaKnown RBP11.06□□□□□ -0.64
SRP54-208ENST00000555557 AKAP5P24588 427 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 PON1P27169 355 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 MCCD1P59942 119 aaPredicted RBP11.06□□□□□ -0.64
SRP54-208ENST00000555557 MYL7Q01449 175 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 TLE2Q04725 743 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 SLC10A6Q3KNW5 377 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 GBP6Q6ZN66 633 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 SV2AQ7L0J3 742 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 OR5B17Q8NGF7 314 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 CACTINQ8WUQ7 758 aaKnown RBP11.06□□□□□ -0.64
SRP54-208ENST00000555557 SEZ6LQ9BYH1 1024 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 RNF39Q9H2S5 420 aa11.06□□□□□ -0.64
SRP54-208ENST00000555557 GCNT4Q9P109 453 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms