RNA–Protein interactions for RNA: ENST00000555359.1

NSFL1C-211, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-211ENST00000555359 DPP7Q9UHL4 492 aa23.22■■□□□ 1.31
NSFL1C-211ENST00000555359 PLXNA3P51805 1871 aa23.22■■□□□ 1.31
NSFL1C-211ENST00000555359 GALR2O43603 387 aaPredicted RBP23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 PRKCBP05771 671 aa23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 GNL2Q13823 731 aaKnown RBP23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 HSP90AA2PQ14568 343 aaPredicted RBP23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 FAM187BQ17R55 369 aa23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 ELMSAN1Q6PJG2 1045 aa23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 CEP57Q86XR8 500 aa23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 ZNF707Q96C28 371 aaPredicted RBP23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 KIFC3Q9BVG8 833 aa23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 C2orf40Q9H1Z8 148 aa23.21■■□□□ 1.31
NSFL1C-211ENST00000555359 N4BP3O15049 544 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 NARSO43776 548 aaKnown RBP23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 EDN1P05305 212 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 CCT6AP40227 531 aaKnown RBP23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 TUSC3Q13454 348 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 MAPK6Q16659 721 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 RTP2Q5QGT7 225 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 EEF1DP3Q658K8 133 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 ST13P5Q8NFI4 369 aaPredicted RBP23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 FBXO18Q8NFZ0 1043 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 MYADMQ96S97 322 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 LLPHQ9BRT6 129 aaKnown RBP23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 NT5C3AQ9H0P0 336 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 FNIP2Q9P278 1114 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 FBXL21Q9UKT6 434 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 GDAQ9Y2T3 454 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 USP34Q70CQ2 3546 aa23.2■■□□□ 1.3
NSFL1C-211ENST00000555359 DENND4AQ7Z401 1863 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 CLUHO75153 1309 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 ACKR2O00590 384 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 PTGESO14684 152 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 PI15O43692 258 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 RECQL4O94761 1208 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 FAM171A1Q5VUB5 890 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 ERICH6BQ5W0A0 696 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 LILRA6Q6PI73 481 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 C4orf32Q8N8J7 132 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 FAM184AQ8NB25 1140 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 IRF2BPLQ9H1B7 796 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 PLEKHA4Q9H4M7 779 aa23.19■■□□□ 1.3
NSFL1C-211ENST00000555359 KIF4AO95239 1232 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 THP07101 528 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 NAMPTP43490 491 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 RBM25P49756 843 aaKnown RBP23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 NUBP1P53384 320 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 CYP26C1Q6V0L0 522 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 HDAC7Q8WUI4 952 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 STAMQ92783 540 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 CCDC113Q9H0I3 377 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 BHMT2Q9H2M3 363 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 IGSF9Q9P2J2 1179 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 DUSP12Q9UNI6 340 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 KIAA1024Q9UPX6 916 aa23.18■■□□□ 1.3
NSFL1C-211ENST00000555359 SF3B1O75533 1304 aaKnown RBP eCLIP23.17■■□□□ 1.31e-8■■■■■ 30.6
NSFL1C-211ENST00000555359 CFHP08603 1231 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 NPR3P17342 541 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 CLCN5P51795 746 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 ORC2Q13416 577 aaPredicted RBP23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 NT5DC1Q5TFE4 455 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 SIX5Q8N196 739 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 IFT74Q96LB3 600 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 ADPGKQ9BRR6 497 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 TTPALQ9BTX7 342 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 PRKD2Q9BZL6 878 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 LRWD1Q9UFC0 647 aa23.17■■□□□ 1.3
NSFL1C-211ENST00000555359 GFRA3O60609 400 aa23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 IGFBP6P24592 240 aaPredicted RBP23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 HAUS3Q68CZ6 603 aa23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 CWF19L1Q69YN2 538 aaKnown RBP23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 GPR65Q8IYL9 337 aa23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 SLC44A3Q8N4M1 653 aa23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 LNX1Q8TBB1 728 aaPredicted RBP23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 ZSCAN31Q96LW9 406 aaPredicted RBP23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 CLSTN3Q9BQT9 956 aa23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 NOL7Q9UMY1 257 aaKnown RBP23.16■■□□□ 1.3
NSFL1C-211ENST00000555359 ZMYM2Q9UBW7 1377 aa23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 STK25O00506 426 aa23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 FXR2P51116 673 aaKnown RBP eCLIP23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 HMGN5P82970 282 aaKnown RBP23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 PPP2R5AQ15172 486 aa23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 NAB2Q15742 525 aa23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 GLRA4Q5JXX5 417 aa23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 GET4Q7L5D6 327 aaPredicted RBP23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 RHOBTB2Q9BYZ6 727 aa23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 DDX19AQ9NUU7 478 aaKnown RBP23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 ZDHHC7Q9NXF8 308 aa23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 EPS15L1Q9UBC2 864 aa23.15■■□□□ 1.3
NSFL1C-211ENST00000555359 ADAM12O43184 909 aa23.14■■□□□ 1.29
NSFL1C-211ENST00000555359 ZMYND10O75800 440 aa23.14■■□□□ 1.29
NSFL1C-211ENST00000555359 C1RP00736 705 aa23.14■■□□□ 1.29
NSFL1C-211ENST00000555359 TRAPPC10P48553 1259 aa23.14■■□□□ 1.29
NSFL1C-211ENST00000555359 TOB1P50616 345 aaPredicted RBP23.14■■□□□ 1.29
NSFL1C-211ENST00000555359 CREMQ03060 361 aa23.14■■□□□ 1.29
NSFL1C-211ENST00000555359 PTGDRQ13258 359 aa23.14■■□□□ 1.29
NSFL1C-211ENST00000555359 PSMD5Q16401 504 aa23.14■■□□□ 1.29
NSFL1C-211ENST00000555359 ATF7IP2Q5U623 682 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms