RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ADAM22Q9P0K1 906 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 GCNT4Q9P109 453 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 ANKRD62A6NC57 917 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 HIP1RO75146 1068 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 TCEA3O75764 348 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SNUPNO95149 360 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 UNC5CO95185 931 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 KRT16P08779 473 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 MAPTP10636 758 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SOX5P35711 763 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ALCAMQ13740 583 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 LBRQ14739 615 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 DLGAP5Q15398 846 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SGSM1Q2NKQ1 1148 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ZNF720Q7Z2F6 126 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 EXOC3L1Q86VI1 746 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SLC9A9Q8IVB4 645 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 LMNTD2Q8IXW0 634 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 INPP5DQ92835 1189 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SLCO2A1Q92959 643 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 TMEM237Q96Q45 408 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 RPS6KC1Q96S38 1066 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ZNF577Q9BSK1 485 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SYT11Q9BT88 431 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 STK33Q9BYT3 514 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 KIF9Q9HAQ2 790 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 DMAC2Q9NW81 257 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 KLHL14Q9P2G3 628 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ZNF70Q9UC06 446 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 FRMD4BQ9Y2L6 1034 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SNX24Q9Y343 169 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 PCDHA3Q9Y5H8 950 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ACTL7BQ9Y614 415 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 CLIC2O15247 247 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 PECAM1P16284 738 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ECE1P42892 770 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 CASP4P49662 377 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 TNIP1Q15025 636 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 TAF11Q15544 211 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ERICH1Q86X53 443 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 MFN1Q8IWA4 741 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 FAM178BQ8IXR5 827 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 KIRREL3Q8IZU9 778 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 C12orf50Q8NA57 414 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 LNX1Q8TBB1 728 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 PIGOQ8TEQ8 1089 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 MAGEB18Q96M61 343 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 SEMA4AQ9H3S1 761 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 PPP1R9AQ9ULJ8 1098 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 PASKQ96RG2 1323 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 ZMYM2Q9UBW7 1377 aa11.45□□□□□ -0.58
MTHFD1-210ENST00000555252 TNS1Q9HBL0 1735 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 YDJCA8MPS7 323 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 TCP10L2B9ZVM9 353 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 EVI5O60447 810 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 NPTXRO95502 500 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 BCRP11274 1271 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 GNAZP19086 355 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 CHRNA5P30532 468 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 RPL21P46778 160 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 CCDC174Q6PII3 467 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 B3GNT9Q6UX72 402 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 ARHGEF18Q6ZSZ5 1173 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 APBB1IPQ7Z5R6 666 aaPredicted RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 OGFOD1Q8N543 542 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 PROCA1Q8NCQ7 364 aaPredicted RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 OLIG1Q8TAK6 271 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 ACER1Q8TDN7 264 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 EPS8L3Q8TE67 593 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 TMEM174Q8WUU8 243 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 ZFAND2BQ8WV99 257 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 LRMDAQ9H2I8 198 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 RNPEPL1Q9HAU8 725 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 ERVK-5Q9HDB9 667 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 FGFR1OP2Q9NVK5 253 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 ETAA1Q9NY74 926 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 WHRNQ9P202 907 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 CPSF2Q9P2I0 782 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 MTUS1Q9ULD2 1270 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 NR2E1Q9Y466 385 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 ARHGEF35A5YM69 484 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 TCP11X1B4DZS4 312 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 CHMP2AO43633 222 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 LMNAP02545 664 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 KRT13P13646 458 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 CALB2P22676 271 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 NMT1P30419 496 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 IFNAR2P48551 515 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 FMO5P49326 533 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 PRPF4BQ13523 1007 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 MTFR1Q15390 333 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 SEL1L2Q5TEA6 688 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 NUGGCQ68CJ6 796 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 FAM83AQ86UY5 434 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms