RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 HNRNPCP07910 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
VTI1B-204ENST00000554659 UCHL3P15374 230 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 SCP2P22307 547 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 GALCP54803 685 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 CIAPIN1Q6FI81 312 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 ARHGAP27Q6ZUM4 889 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 XPO6Q96QU8 1125 aaKnown RBP14.77□□□□□ -0.05
VTI1B-204ENST00000554659 MAGEB5Q9BZ81 275 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 POLR3FQ9H1D9 316 aaPredicted RBP14.77□□□□□ -0.05
VTI1B-204ENST00000554659 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
VTI1B-204ENST00000554659 BFARQ9NZS9 450 aa14.77□□□□□ -0.05
VTI1B-204ENST00000554659 KIAA0391O15091 583 aaKnown RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 PMS1P54277 932 aaKnown RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 Q3C1V9 767 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 ITPRIPL1Q6GPH6 555 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 AGGF1Q8N302 714 aaeCLIP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 SGSM3Q96HU1 749 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 GABBR1Q9UBS5 961 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 SBK1Q52WX2 424 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 RASSF3Q86WH2 238 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 ENGASEQ8NFI3 743 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 MRPL4Q9BYD3 311 aaKnown RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 RBAKQ9NYW8 714 aaPredicted RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 TRIM10Q9UDY6 481 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 NCOA3Q9Y6Q9 1424 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 ABCA6Q8N139 1617 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 POLR1AO95602 1720 aaPredicted RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 LSP1P33241 339 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 EFTUD2Q15029 972 aaKnown RBP eCLIP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 RCOR2Q8IZ40 523 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 ARMC2Q8NEN0 867 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 ALKBH8Q96BT7 664 aaKnown RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 TRIM51Q9BSJ1 452 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 BATF3Q9NR55 127 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 STX18Q9P2W9 335 aaKnown RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 CYP26A1O43174 497 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 FDPSP14324 419 aaKnown RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 RARS2Q5T160 578 aaKnown RBP14.76□□□□□ -0.05
VTI1B-204ENST00000554659 CATSPER1Q8NEC5 780 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 SLC13A1Q9BZW2 595 aa14.76□□□□□ -0.05
VTI1B-204ENST00000554659 NBPF26B4DH59 902 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 ANTXR2P58335 489 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 ZC3H12BQ5HYM0 836 aaKnown RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 NBPF15Q8N660 670 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 CCNYL1Q8N7R7 359 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 BEST2Q8NFU1 509 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 NSUN4Q96CB9 384 aaKnown RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 HOXC10Q9NYD6 342 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 SFMBT1Q9UHJ3 866 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 HUS1O60921 280 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 CAPRIN1Q14444 709 aaKnown RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 MAPRE2Q15555 327 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 HPS3Q969F9 1004 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 L2HGDHQ9H9P8 463 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 HLA-DPA1P20036 260 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 PGM1P36871 562 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 STK4Q13043 487 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 SLC26A7Q8TE54 656 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 SEC16BQ96JE7 1060 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 KIF9Q9HAQ2 790 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 TBX3O15119 743 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 SNX2O60749 519 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 NMT1P30419 496 aaKnown RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 IREB2P48200 963 aaKnown RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 HIC1Q14526 733 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 SWSAP1Q6NVH7 229 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 RHPN2Q8IUC4 686 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 SYN2Q92777 582 aaPredicted RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 ROPN1BQ9BZX4 212 aaPredicted RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 ROPN1Q9HAT0 212 aaPredicted RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 PALMDQ9NP74 551 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 AGO2Q9UKV8 859 aaKnown RBP14.75□□□□□ -0.05
VTI1B-204ENST00000554659 ZHX2Q9Y6X8 837 aa14.75□□□□□ -0.05
VTI1B-204ENST00000554659 TYK2P29597 1187 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 FMO5P49326 533 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 FAM102AQ5T9C2 384 aaPredicted RBP14.74□□□□□ -0.05
VTI1B-204ENST00000554659 ISCUQ9H1K1 167 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 RNF146Q9NTX7 359 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 DDX28Q9NUL7 540 aaKnown RBP14.74□□□□□ -0.05
VTI1B-204ENST00000554659 ADA2Q9NZK5 511 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 CTDNEP1O95476 244 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 AKR1B1P15121 316 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 IRAK1P51617 712 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 SNRNP48Q6IEG0 339 aaKnown RBP14.74□□□□□ -0.05
VTI1B-204ENST00000554659 FRA10AC1Q70Z53 315 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 TDRD3Q9H7E2 651 aaKnown RBP14.74□□□□□ -0.05
VTI1B-204ENST00000554659 CYP4F11Q9HBI6 524 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 LRFN2Q9ULH4 789 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 RAD51CO43502 376 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 FDX1P10109 184 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 ZIM3Q96PE6 472 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 KCND2Q9NZV8 630 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 ADGRB3O60242 1522 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 KRT4P19013 534 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 CEP55Q53EZ4 464 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 SUGT1Q9Y2Z0 365 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 NPHP3-ACAD11A0A0J9YXS1 232 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 PIK3R2O00459 728 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms