RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ALDH1L1O75891 902 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 ADRB1P08588 477 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 GBP2P32456 591 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 CTNNB1P35222 781 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 COPB2P35606 906 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 MCAMP43121 646 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 GALK1P51570 392 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 RRP1P56182 461 aaKnown RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 CBX2Q14781 532 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 MAMDC4Q6UXC1 1216 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 REC114Q7Z4M0 266 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 METTL16Q86W50 562 aaKnown RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 MYOCDQ8IZQ8 938 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 ANKRD44Q8N8A2 993 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 KREMEN2Q8NCW0 462 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 DHX38Q92620 1227 aaKnown RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 RUBCNQ92622 972 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 NSUN4Q96CB9 384 aaKnown RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 YME1L1Q96TA2 773 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 PHF7Q9BWX1 381 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 SLC6A17Q9H1V8 727 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 SEMA4AQ9H3S1 761 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 ZNF552Q9H707 407 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 LRP2BPQ9P2M1 347 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 USP15Q9Y4E8 981 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-226ENST00000554350 MCM3APO60318 1980 aa6.78□□□□□ -1.32
ATXN3-226ENST00000554350 DNAH14Q0VDD8 3507 aa6.77□□□□□ -1.32
ATXN3-226ENST00000554350 FANCIQ9NVI1 1328 aa6.77□□□□□ -1.32
ATXN3-226ENST00000554350 TANC1Q9C0D5 1861 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 ABHD14A-ACY1A0A1B0GW23 586 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 A0A1W2PRG0 241 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 UBOX5O94941 541 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 AMHP03971 560 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 INHBBP09529 407 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 DLG4P78352 724 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 MPP2Q14168 576 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 ZNF605Q86T29 641 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 CCDC144CPQ8IYA2 1237 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 ANKRD35Q8N283 1001 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 GOLM1Q8NBJ4 401 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 HDAC8Q9BY41 377 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 SERPINB13Q9UIV8 391 aa6.77□□□□□ -1.33
ATXN3-226ENST00000554350 CTDP1Q9Y5B0 961 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-226ENST00000554350 WDR87Q6ZQQ6 2873 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 VWA5AO00534 786 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 NUAK1O60285 661 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 EFCAB14O75071 495 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 EYA4O95677 639 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 NKX3-2P78367 333 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 LRRFIP1Q32MZ4 808 aaKnown RBP6.76□□□□□ -1.33
ATXN3-226ENST00000554350 RABL6Q3YEC7 729 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-226ENST00000554350 KIAA1755Q5JYT7 1200 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 SNRNP48Q6IEG0 339 aaKnown RBP6.76□□□□□ -1.33
ATXN3-226ENST00000554350 NAA16Q6N069 864 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-226ENST00000554350 TATDN1Q6P1N9 297 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATXN3-226ENST00000554350 LRRC8DQ7L1W4 858 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 EEPD1Q7L9B9 569 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 ANKS4BQ8N8V4 417 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 SMRP1Q8NCR6 262 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 PPP2R3CQ969Q6 453 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 FBXO28Q9NVF7 368 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 NCDNQ9UBB6 729 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 BARX2Q9UMQ3 279 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-226ENST00000554350 FLNBO75369 2602 aaKnown RBP6.76□□□□□ -1.33
ATXN3-226ENST00000554350 NCANO14594 1321 aa6.76□□□□□ -1.33
ATXN3-226ENST00000554350 PDS5AQ29RF7 1337 aaKnown RBP6.76□□□□□ -1.33
ATXN3-226ENST00000554350 SLC22A31A6NKX4 558 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 APAF1O14727 1248 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 RGS13O14921 159 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 GRM6O15303 877 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 SORBS3O60504 671 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 SEMA7AO75326 666 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 GUCY1A2P33402 732 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 CLCN5P51795 746 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 CHRNEQ04844 493 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 ADAM15Q13444 863 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 TCTN1Q2MV58 587 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 SNAP47Q5SQN1 464 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 GORABQ5T7V8 394 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 ZC3H14Q6PJT7 736 aaKnown RBP6.75□□□□□ -1.33
ATXN3-226ENST00000554350 ATG9AQ7Z3C6 839 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 RBM23Q86U06 439 aaKnown RBP6.75□□□□□ -1.33
ATXN3-226ENST00000554350 NLRX1Q86UT6 975 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 RELL1Q8IUW5 271 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 UBALD2Q8IYN6 164 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 CPXCR1Q8N123 301 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 MAGEB6Q8N7X4 407 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 SPATA5Q8NB90 893 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-226ENST00000554350 AFAP1L1Q8TED9 768 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 RIN2Q8WYP3 895 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-226ENST00000554350 MSLNLQ96KJ4 702 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 C20orf173Q96LM9 149 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 MTG1Q9BT17 334 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-226ENST00000554350 C11orf84Q9BUA3 381 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-226ENST00000554350 TEX13BQ9BXU2 312 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 LRRC3Q9BY71 257 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms