RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 RNF207Q6ZRF8 634 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 FBXL13Q8NEE6 735 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 NT5C1BQ96P26 610 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 IWS1Q96ST2 819 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 TRIM7Q9C029 511 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 WNT8AQ9H1J5 351 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 ST6GALNAC4Q9H4F1 302 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 PXMP2Q9NR77 195 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 RAB20Q9NX57 234 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 PCYOX1Q9UHG3 505 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 RIPK3Q9Y572 518 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 HNRNPDLO14979 420 aaKnown RBP15.63■□□□□ 0.09
ACTN1-211ENST00000553882 EIF3BP55884 814 aaKnown RBP15.63■□□□□ 0.09
ACTN1-211ENST00000553882 CDR2Q01850 454 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 FKBP1CQ5VVH2 108 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 LLGL2Q6P1M3 1020 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 SV2AQ7L0J3 742 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 HOOK3Q86VS8 718 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 SLC13A5Q86YT5 568 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-211ENST00000553882 MAP4K3Q8IVH8 894 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 RTKN2Q8IZC4 609 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 VTI1AQ96AJ9 217 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 CEP170P1Q96L14 293 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 SELENOSQ9BQE4 189 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 TMEM8AQ9HCN3 771 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 ADGRA3Q8IWK6 1321 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 IFI35P80217 286 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-211ENST00000553882 SNX1Q13596 522 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 CLUL1Q15846 466 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 DAB2IPQ5VWQ8 1189 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 SPATS2Q86XZ4 545 aaKnown RBP15.62■□□□□ 0.09
ACTN1-211ENST00000553882 TMEM174Q8WUU8 243 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 C1orf54Q8WWF1 131 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 TLCD1Q96CP7 247 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 AZI2Q9H6S1 392 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.62■□□□□ 0.09
ACTN1-211ENST00000553882 GABBR1Q9UBS5 961 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 EXOC7Q9UPT5 735 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 MAPK13O15264 365 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 CYP1A2P05177 515 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 HSPA6P17066 643 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 COILP38432 576 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-211ENST00000553882 CXCL9Q07325 125 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 EPS8L3Q8TE67 593 aaKnown RBP15.62■□□□□ 0.09
ACTN1-211ENST00000553882 LPAR1Q92633 364 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 BICD1Q96G01 975 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 FAM213AQ9BRX8 229 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 RPAP3Q9H6T3 665 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-211ENST00000553882 ANAPC7Q9UJX3 599 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 GTF3C4Q9UKN8 822 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 PCDHA3Q9Y5H8 950 aa15.62■□□□□ 0.09
ACTN1-211ENST00000553882 PODXLO00592 558 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 ZNF862O60290 1169 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 CTNND1O60716 968 aaKnown RBP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 NUDT17P0C025 328 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 GPC3P51654 580 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 JAK3P52333 1124 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 DRG2P55039 364 aaKnown RBP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 BAATQ14032 418 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 DDX1Q92499 740 aaKnown RBP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 PAGR1Q9BTK6 254 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 MTRF1LQ9UGC7 380 aaKnown RBP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 MTUS1Q9ULD2 1270 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 ZNRF3Q9ULT6 936 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 ZNFX1Q9P2E3 1918 aaKnown RBP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 RGS16O15492 202 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 MTA2O94776 668 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 RWDD2BP57060 319 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 KRT76Q01546 638 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 PSME4Q14997 1843 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 TCEAL1Q15170 157 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 PPP1R7Q15435 360 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 SIX1Q15475 284 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.61■□□□□ 0.09
ACTN1-211ENST00000553882 CPLX4Q7Z7G2 160 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 NLRX1Q86UT6 975 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 CPA5Q8WXQ8 436 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 ATG4AQ8WYN0 398 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 CABS1Q96KC9 395 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 CCDC113Q9H0I3 377 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 MYOZ2Q9NPC6 264 aa15.61■□□□□ 0.09
ACTN1-211ENST00000553882 ATXN2Q99700 1313 aaKnown RBP15.6■□□□□ 0.09
ACTN1-211ENST00000553882 CHN1P15882 459 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 SSTR3P32745 418 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-211ENST00000553882 CYP24A1Q07973 514 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 SPRED3Q2MJR0 410 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 CCDC38Q502W7 563 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 ATG4CQ96DT6 458 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 KIAA1683Q9H0B3 1180 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 COQ4Q9Y3A0 265 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 PMM2O15305 246 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 GRIN3BO60391 1043 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 ATP2C2O75185 946 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 SFNP31947 248 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 BYSLQ13895 437 aaKnown RBP15.6■□□□□ 0.09
ACTN1-211ENST00000553882 SEC16BQ96JE7 1060 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 TIPINQ9BVW5 301 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 MOV10L1Q9BXT6 1211 aaKnown RBP15.6■□□□□ 0.09
ACTN1-211ENST00000553882 ANKEF1Q9NU02 776 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms