RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TRIM50Q86XT4 487 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 ANKRD20A12PQ8NF67 263 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 VN1R2Q8NFZ6 395 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 DHX33Q9H6R0 707 aaKnown RBP15.86■□□□□ 0.13
SHMT2-208ENST00000553868 TBC1D7Q9P0N9 293 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 ADGRA3Q8IWK6 1321 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 COL1A2P08123 1366 aa15.86■□□□□ 0.13
SHMT2-208ENST00000553868 H3BRB1 525 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 HAS3O00219 553 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 PER2O15055 1255 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 ITGB1P05556 798 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 CDK11BP21127 795 aaKnown RBP15.85■□□□□ 0.13
SHMT2-208ENST00000553868 STX17P56962 302 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 SPAG1Q07617 926 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 DMP1Q13316 513 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-208ENST00000553868 BMT2Q1RMZ1 405 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 CENPPQ6IPU0 288 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 SARM1Q6SZW1 724 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 MAEAQ7L5Y9 396 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 SERINC5Q86VE9 423 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 DAW1Q8N136 415 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 TCP11Q8WWU5 503 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 CLP1Q92989 425 aaKnown RBP15.85■□□□□ 0.13
SHMT2-208ENST00000553868 SH2D3AQ9BRG2 576 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 APOL5Q9BWW9 433 aa15.85■□□□□ 0.13
SHMT2-208ENST00000553868 TUT1Q9H6E5 874 aaKnown RBP15.85■□□□□ 0.13
SHMT2-208ENST00000553868 RC3H2Q9HBD1 1191 aaKnown RBP15.85■□□□□ 0.13
SHMT2-208ENST00000553868 KIAA1671Q9BY89 1806 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 SFI1A8K8P3 1242 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 MAGEB2O15479 319 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 MAFO75444 373 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-208ENST00000553868 F2P00734 622 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 ATF7P17544 494 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-208ENST00000553868 COL9A2Q14055 689 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-208ENST00000553868 ST3GAL2Q16842 350 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 TTI2Q6NXR4 508 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 EPM2AIP1Q7L775 607 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-208ENST00000553868 ZNF507Q8TCN5 953 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 SPPL3Q8TCT6 385 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 SCFD1Q8WVM8 642 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 SPIRE2Q8WWL2 714 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 PPP2R3CQ969Q6 453 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 HVCN1Q96D96 273 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 C16orf70Q9BSU1 422 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 POLR3FQ9H1D9 316 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-208ENST00000553868 ST6GALNAC4Q9H4F1 302 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 THAP9Q9H5L6 903 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 FANCLQ9NW38 375 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 MAGEC2Q9UBF1 373 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-208ENST00000553868 CDH22Q9UJ99 828 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 RWDD3Q9Y3V2 267 aa15.84■□□□□ 0.13
SHMT2-208ENST00000553868 MYH9P35579 1960 aaKnown RBP15.84■□□□□ 0.13
SHMT2-208ENST00000553868 USP24Q9UPU5 2620 aa15.83■□□□□ 0.13
SHMT2-208ENST00000553868 RRN3P2A6NIE6 340 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 K7ENM7 598 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 CBFA2T2O43439 604 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 CALUO43852 315 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-208ENST00000553868 DEKP35659 375 aaKnown RBP15.83■□□□□ 0.12
SHMT2-208ENST00000553868 DNM2P50570 870 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 PEX3P56589 373 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 BTG3Q14201 252 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-208ENST00000553868 KNOP1Q1ED39 458 aaKnown RBP15.83■□□□□ 0.12
SHMT2-208ENST00000553868 IER5Q5VY09 327 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 ZNF720Q7Z2F6 126 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 CSGALNACT2Q8N6G5 542 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 GOLGA5Q8TBA6 731 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 POF1BQ8WVV4 589 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 CEP89Q96ST8 783 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 TRIM5Q9C035 493 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 TMEM206Q9H813 350 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 XPNPEP1Q9NQW7 623 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 DLL3Q9NYJ7 618 aa15.83■□□□□ 0.12
SHMT2-208ENST00000553868 CCDC169A6NNP5 214 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 PI15O43692 258 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 SERPINC1P01008 464 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 TPM3P06753 285 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 MYBP10242 640 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 NMT1P30419 496 aaKnown RBP15.82■□□□□ 0.12
SHMT2-208ENST00000553868 NCKAP1LP55160 1127 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 CCDC173Q0VFZ6 552 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 MTMR3Q13615 1198 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 EDRF1Q3B7T1 1238 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 ANKRD40Q6AI12 368 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 NELFCDQ8IXH7 590 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 ACCSQ96QU6 501 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 MED15Q96RN5 788 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 NTPCRQ9BSD7 190 aaKnown RBP15.82■□□□□ 0.12
SHMT2-208ENST00000553868 GPRC5CQ9NQ84 441 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 KMT5AQ9NQR1 393 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 TYW1Q9NV66 732 aaKnown RBP15.82■□□□□ 0.12
SHMT2-208ENST00000553868 CGNQ9P2M7 1197 aaKnown RBP15.82■□□□□ 0.12
SHMT2-208ENST00000553868 EXOC7Q9UPT5 735 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 MRPL42Q9Y6G3 142 aaKnown RBP15.82■□□□□ 0.12
SHMT2-208ENST00000553868 PHLPP2Q6ZVD8 1323 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 ARID2Q68CP9 1835 aa15.82■□□□□ 0.12
SHMT2-208ENST00000553868 PDXKO00764 312 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 ASAP2O43150 1006 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms