RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 TMC7Q7Z402 723 aa22.34■■□□□ 1.17
FOXA1-203ENST00000553751 RBM23Q86U06 439 aaKnown RBP22.34■■□□□ 1.17
FOXA1-203ENST00000553751 DNAJC19Q96DA6 116 aa22.34■■□□□ 1.17
FOXA1-203ENST00000553751 CHAMP1Q96JM3 812 aa22.34■■□□□ 1.17
FOXA1-203ENST00000553751 COL25A1Q9BXS0 654 aaPredicted RBP22.34■■□□□ 1.17
FOXA1-203ENST00000553751 ZBP1Q9H171 429 aa22.34■■□□□ 1.17
FOXA1-203ENST00000553751 RCOR1Q9UKL0 485 aa22.34■■□□□ 1.17
FOXA1-203ENST00000553751 FAN1Q9Y2M0 1017 aa22.34■■□□□ 1.17
FOXA1-203ENST00000553751 PRG3Q9Y2Y8 225 aaPredicted RBP22.34■■□□□ 1.17
FOXA1-203ENST00000553751 TBX10O75333 385 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 TOM1L1O75674 476 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 GRM5P41594 1212 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 OR1G1P47890 313 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 ME1P48163 572 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 ADAM15Q13444 863 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 LEXMQ3ZCV2 418 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 ZBTB33Q86T24 672 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 FAM178BQ8IXR5 827 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 VPS52Q8N1B4 723 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 EFHBQ8N7U6 833 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 ZBTB45Q96K62 511 aaPredicted RBP22.33■■□□□ 1.17
FOXA1-203ENST00000553751 TLE6Q9H808 572 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 ANKFY1Q9P2R3 1169 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 TBX20Q9UMR3 447 aa22.33■■□□□ 1.17
FOXA1-203ENST00000553751 F8W810 466 aa22.32■■□□□ 1.16
FOXA1-203ENST00000553751 H3BQ06 376 aaPredicted RBP22.32■■□□□ 1.16
FOXA1-203ENST00000553751 PER2O15055 1255 aa22.32■■□□□ 1.16
FOXA1-203ENST00000553751 BMP1P13497 986 aa22.32■■□□□ 1.16
FOXA1-203ENST00000553751 NMT1P30419 496 aaKnown RBP22.32■■□□□ 1.16
FOXA1-203ENST00000553751 DLX2Q07687 328 aaPredicted RBP22.32■■□□□ 1.16
FOXA1-203ENST00000553751 SMC1AQ14683 1233 aaKnown RBP22.32■■□□□ 1.16
FOXA1-203ENST00000553751 NAB2Q15742 525 aa22.32■■□□□ 1.16
FOXA1-203ENST00000553751 DUSP6Q16828 381 aa22.32■■□□□ 1.16
FOXA1-203ENST00000553751 EP400NLQ6ZTU2 488 aa22.32■■□□□ 1.16
FOXA1-203ENST00000553751 SFR1Q86XK3 245 aa22.32■■□□□ 1.16
FOXA1-203ENST00000553751 TCHPQ9BT92 498 aa22.32■■□□□ 1.16
FOXA1-203ENST00000553751 C2orf71A6NGG8 1288 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 GLP2RO95838 553 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 EFEMP2O95967 443 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 PIGRP01833 764 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 GTF2BQ00403 316 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 MCL1Q07820 350 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 TUSC3Q13454 348 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 NOLC1Q14978 699 aaKnown RBP eCLIP22.31■■□□□ 1.16
FOXA1-203ENST00000553751 RESP18Q5W5W9 173 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 MRPL43Q8N983 215 aaKnown RBP22.31■■□□□ 1.16
FOXA1-203ENST00000553751 VN1R2Q8NFZ6 395 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.31■■□□□ 1.16
FOXA1-203ENST00000553751 CDCA3Q99618 268 aaPredicted RBP22.31■■□□□ 1.16
FOXA1-203ENST00000553751 CCDC94Q9BW85 323 aaPredicted RBP22.31■■□□□ 1.16
FOXA1-203ENST00000553751 HAPLN2Q9GZV7 340 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 CUEDC2Q9H467 287 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 ST6GALNAC4Q9H4F1 302 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 STK39Q9UEW8 545 aa22.31■■□□□ 1.16
FOXA1-203ENST00000553751 FRMD3A2A2Y4 597 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 NR1I2O75469 434 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 THP07101 528 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 CTSAP10619 480 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 HARSP12081 509 aaKnown RBP22.3■■□□□ 1.16
FOXA1-203ENST00000553751 OSTNP61366 133 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 KRT85P78386 507 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 MAP4K3Q8IVH8 894 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 RNF168Q8IYW5 571 aaPredicted RBP22.3■■□□□ 1.16
FOXA1-203ENST00000553751 AUTS2Q8WXX7 1259 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 DHX58Q96C10 678 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 BICD1Q96G01 975 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 TNMDQ9H2S6 317 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 KBTBD4Q9NVX7 518 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 CACNG4Q9UBN1 327 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 SEL1LQ9UBV2 794 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 IRAK3Q9Y616 596 aa22.3■■□□□ 1.16
FOXA1-203ENST00000553751 FSD2A1L4K1 749 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 HNRNPDLO14979 420 aaKnown RBP22.29■■□□□ 1.16
FOXA1-203ENST00000553751 MEFVO15553 781 aaPredicted RBP22.29■■□□□ 1.16
FOXA1-203ENST00000553751 GAP43P17677 238 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 ABCD1P33897 745 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 LIG4P49917 911 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 YARSP54577 528 aaKnown RBP22.29■■□□□ 1.16
FOXA1-203ENST00000553751 RBM10P98175 930 aaKnown RBP22.29■■□□□ 1.16
FOXA1-203ENST00000553751 KCNC3Q14003 757 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 PTPN14Q15678 1187 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 ZC2HC1CQ53FD0 456 aaPredicted RBP22.29■■□□□ 1.16
FOXA1-203ENST00000553751 XKR4Q5GH76 650 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 GLRA4Q5JXX5 417 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 ALKAL1Q6UXT8 129 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 ADAMTS19Q8TE59 1207 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 LEO1Q8WVC0 666 aaPredicted RBP22.29■■□□□ 1.16
FOXA1-203ENST00000553751 RABGGTAQ92696 567 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 STAMQ92783 540 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 SNX27Q96L92 541 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 PPP1R10Q96QC0 940 aaKnown RBP22.29■■□□□ 1.16
FOXA1-203ENST00000553751 PAAF1Q9BRP4 392 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 TOPORSQ9NS56 1045 aaPredicted RBP22.29■■□□□ 1.16
FOXA1-203ENST00000553751 CLEC1BQ9P126 229 aa22.29■■□□□ 1.16
FOXA1-203ENST00000553751 NCOR1O75376 2440 aa22.28■■□□□ 1.16
FOXA1-203ENST00000553751 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.28■■□□□ 1.16
FOXA1-203ENST00000553751 CASTOR2A6NHX0 329 aa22.28■■□□□ 1.16
FOXA1-203ENST00000553751 DLL1O00548 723 aa22.28■■□□□ 1.16
FOXA1-203ENST00000553751 CLDN3O15551 220 aa22.28■■□□□ 1.16
FOXA1-203ENST00000553751 PPP1R37O75864 691 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms