RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 RPAP1Q9BWH6 1393 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ZNF335Q9H4Z2 1342 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 PER1O15534 1290 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 GSTM4Q03013 218 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 KLHL30Q0D2K2 578 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ADCK1Q86TW2 530 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC33Q8N5R6 958 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 HSPH1Q92598 858 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TMBIM4Q9HC24 238 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 RBM12Q9NTZ6 932 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 NOC2LQ9Y3T9 749 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 OR6B1O95007 311 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 LDLRAP1Q5SW96 308 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 STARD8Q92502 1023 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 GCNAQ96QF7 691 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ANAPC5Q9UJX4 755 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 PLCL2Q9UPR0 1127 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 KLHL20Q9Y2M5 609 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TRAF5O00463 557 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 EVI2BP34910 448 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 SIRT2Q8IXJ6 389 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 OR8K3Q8NH51 312 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 NCOA7Q8NI08 942 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 C17orf80Q9BSJ5 609 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TDRD1Q9BXT4 1180 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TUT1Q9H6E5 874 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 HMG20BQ9P0W2 317 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 PCSK1NQ9UHG2 260 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 MAGED1Q9Y5V3 778 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 PI4KAP2A4QPH2 592 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ZNF839A8K0R7 811 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 RGL2O15211 777 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ZC3H11AO75152 810 aaKnown RBP eCLIP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TRMUO75648 421 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ZNF806P0C7X5 589 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 HSD17B3P37058 310 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ETFBP38117 255 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 POLGP54098 1239 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 PTK2BQ14289 1009 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 SPDYAQ5MJ70 313 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 SCARA3Q6AZY7 606 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ALG1LQ6GMV1 187 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 CRTC1Q6UUV9 634 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 KRT26Q7Z3Y9 468 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TTC5Q8N0Z6 440 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 PI4KAP1Q8N8J0 262 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 HTRA1Q92743 480 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TMLHEQ9NVH6 421 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 SENP1Q9P0U3 644 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 KIAA1257Q9ULG3 409 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ZNF652Q9Y2D9 606 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TRIM75PA6NK02 468 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 APOA1P02647 267 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 PRKCBP05771 671 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 SLC12A2P55011 1212 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 ACAP2Q15057 778 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 TIGD2Q4W5G0 525 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 LINS1Q8NG48 757 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 PGBD4Q96DM1 585 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 DMRTB1Q96MA1 342 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 MYD88Q99836 296 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 FOXP3Q9BZS1 431 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 NDST4Q9H3R1 872 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 LIN28AQ9H9Z2 209 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 NOX1Q9Y5S8 564 aa9.5□□□□□ -0.89
GTF2A1-203ENST00000553612 IKBKBO14920 756 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 SLC4A1P02730 911 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 NELFEP18615 380 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 NCF2P19878 526 aaPredicted RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 EXOC3L1Q86VI1 746 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 HORMAD1Q86X24 394 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 SRBD1Q8N5C6 995 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 SHCBP1LQ9BZQ2 653 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 SEPT3Q9UH03 358 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 SRP68Q9UHB9 627 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 MYO1DO94832 1006 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 KCNJ6P48051 423 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 GPC3P51654 580 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 EFR3AQ14156 821 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 LSM14BQ9BX40 385 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 ZSWIM6Q9HCJ5 1215 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 FIS1Q9Y3D6 152 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 TYW5A2RUC4 315 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 H3BRJ5 948 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 AXIN1O15169 862 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 SGTAO43765 313 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 CDK7P50613 346 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 PLD1Q13393 1074 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 ZC2HC1CQ53FD0 456 aaPredicted RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 KLHL35Q6PF15 583 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 CROCCP2Q86T23 111 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 SIX6OS1Q8N1H7 587 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 CLIP4Q8N3C7 705 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 TC2NQ8N9U0 490 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC90BQ9GZT6 254 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 PSTPIP2Q9H939 334 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms