RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 EXOC6Q8TAG9 804 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 SLC7A14Q8TBB6 771 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 RABGGTAQ92696 567 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 ELSPBP1Q96BH3 223 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 JPH2Q9BR39 696 aaPredicted RBP15.45■□□□□ 0.06
PRPF39-204ENST00000553605 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 BRD9Q9H8M2 597 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 RXFP3Q9NSD7 469 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 GDE1Q9NZC3 331 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 HES2Q9Y543 173 aa15.45■□□□□ 0.06
PRPF39-204ENST00000553605 ADAMTS3O15072 1205 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 POU2F2P09086 479 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 AXDND1Q5T1B0 1012 aaPredicted RBP15.44■□□□□ 0.06
PRPF39-204ENST00000553605 LRCH2Q5VUJ6 765 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 LRSAM1Q6UWE0 723 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 CEP68Q76N32 757 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 SGMS1Q86VZ5 419 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 LNX1Q8TBB1 728 aaPredicted RBP15.44■□□□□ 0.06
PRPF39-204ENST00000553605 LSM14BQ9BX40 385 aaKnown RBP15.44■□□□□ 0.06
PRPF39-204ENST00000553605 TEKT3Q9BXF9 490 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 EIF2AQ9BY44 585 aaKnown RBP15.44■□□□□ 0.06
PRPF39-204ENST00000553605 ARRDC1-AS1Q9H2J1 176 aa15.44■□□□□ 0.06
PRPF39-204ENST00000553605 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
PRPF39-204ENST00000553605 RBM8AQ9Y5S9 174 aaKnown RBP15.44■□□□□ 0.06
PRPF39-204ENST00000553605 SF3B1O75533 1304 aaKnown RBP eCLIP15.43■□□□□ 0.06
PRPF39-204ENST00000553605 AXIN1O15169 862 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 ZNF806P0C7X5 589 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 CHRNB1P11230 501 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 CHMLP26374 656 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 GAS6Q14393 721 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 GRM2Q14416 872 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 PSMD5Q16401 504 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 HEATR6Q6AI08 1181 aaKnown RBP15.43■□□□□ 0.06
PRPF39-204ENST00000553605 POTEHQ6S545 545 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 MIER3Q7Z3K6 550 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 CEP57Q86XR8 500 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 REXO1Q8N1G1 1221 aaKnown RBP15.43■□□□□ 0.06
PRPF39-204ENST00000553605 SPEM1Q8N4L4 309 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 RDM1Q8NG50 284 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 PRPF31Q8WWY3 499 aaKnown RBP15.43■□□□□ 0.06
PRPF39-204ENST00000553605 PIK3R5Q8WYR1 880 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 SLC5A5Q92911 643 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 TTPALQ9BTX7 342 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 TRMT61BQ9BVS5 477 aaKnown RBP15.43■□□□□ 0.06
PRPF39-204ENST00000553605 APOL6Q9BWW8 343 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 GIT1Q9Y2X7 761 aa15.43■□□□□ 0.06
PRPF39-204ENST00000553605 ADAM12O43184 909 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 ERLIN2O94905 339 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 CCDC6Q16204 474 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 RTN1Q16799 776 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 FAM171A1Q5VUB5 890 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 PSAPL1Q6NUJ1 521 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 APOA5Q6Q788 366 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 ANO5Q75V66 913 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 GSTCDQ8NEC7 633 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 IRF7Q92985 503 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 GJA10Q969M2 543 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 ZMYND12Q9H0C1 365 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 ZNF334Q9HCZ1 680 aaPredicted RBP15.42■□□□□ 0.06
PRPF39-204ENST00000553605 C6orf50Q9HD87 102 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 NOTCH4Q99466 2003 aa15.42■□□□□ 0.06
PRPF39-204ENST00000553605 TDRD15B5MCY1 1934 aaKnown RBP15.42■□□□□ 0.06
PRPF39-204ENST00000553605 ESYT2A0FGR8 921 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 TMEM8BA6NDV4 472 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 SRRM3A6NNA2 597 aaPredicted RBP15.41■□□□□ 0.06
PRPF39-204ENST00000553605 K7ESF4 209 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 SGSM2O43147 1006 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 RHOP08100 348 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 AXLP30530 894 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
PRPF39-204ENST00000553605 LAMTOR4Q0VGL1 99 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 HSP90AA2PQ14568 343 aaPredicted RBP15.41■□□□□ 0.06
PRPF39-204ENST00000553605 SLC5A9Q2M3M2 681 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 PLA2G4FQ68DD2 849 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 NOTUMQ6P988 496 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 RTL10Q7L3V2 364 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 PSPC1Q8WXF1 523 aaKnown RBP15.41■□□□□ 0.06
PRPF39-204ENST00000553605 SLC7A3Q8WY07 619 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 CCDC136Q96JN2 1154 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 CSRNP2Q9H175 543 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 ZFP14Q9HCL3 533 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 TRPV5Q9NQA5 729 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 PIAS3Q9Y6X2 628 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 F5P12259 2224 aa15.41■□□□□ 0.06
PRPF39-204ENST00000553605 PSMD10O75832 226 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 PAPSS2O95340 614 aaPredicted RBP15.4■□□□□ 0.06
PRPF39-204ENST00000553605 GSPT1P15170 499 aaKnown RBP15.4■□□□□ 0.06
PRPF39-204ENST00000553605 CEBPBP17676 345 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 FCARP24071 287 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 AKAP5P24588 427 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 RING1Q06587 406 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 GRIK3Q13003 919 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 RAB33AQ14088 237 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 PFKFB3Q16875 520 aaPredicted RBP15.4■□□□□ 0.06
PRPF39-204ENST00000553605 MAP4K3Q8IVH8 894 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 HACE1Q8IYU2 909 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 HASPINQ8TF76 798 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 TMEM143Q96AN5 459 aa15.4■□□□□ 0.06
PRPF39-204ENST00000553605 CCDC51Q96ER9 411 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms