RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 CXCL16Q9H2A7 254 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 CACNG4Q9UBN1 327 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 BARX2Q9UMQ3 279 aaPredicted RBP25.91■■□□□ 1.74
TDP1-205ENST00000553527 TNFSF13BQ9Y275 285 aa25.91■■□□□ 1.74
TDP1-205ENST00000553527 GRXCR2A6NFK2 248 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 INPPL1O15357 1258 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 NR1I2O75469 434 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 GLP2RO95838 553 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 HARSP12081 509 aaKnown RBP25.9■■□□□ 1.74
TDP1-205ENST00000553527 GIT2Q14161 759 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 ZNF568Q3ZCX4 644 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 TMEM161BQ8NDZ6 487 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 KCNG4Q8TDN1 519 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 VN1R3Q9BXE9 311 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 ODF2LQ9ULJ1 636 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 C5orf42Q9H799 3197 aa25.9■■□□□ 1.74
TDP1-205ENST00000553527 CUL9Q8IWT3 2517 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.89■■□□□ 1.74
TDP1-205ENST00000553527 C2orf71A6NGG8 1288 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 F8W810 466 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 DSC1Q08554 894 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 GRIK3Q13003 919 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 DYMQ7RTS9 669 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 APBB1IPQ7Z5R6 666 aaPredicted RBP25.89■■□□□ 1.74
TDP1-205ENST00000553527 ZBTB45Q96K62 511 aaPredicted RBP25.89■■□□□ 1.74
TDP1-205ENST00000553527 CDCA3Q99618 268 aaPredicted RBP25.89■■□□□ 1.74
TDP1-205ENST00000553527 ZBP1Q9H171 429 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 CLEC1BQ9P126 229 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 CD207Q9UJ71 328 aa25.89■■□□□ 1.74
TDP1-205ENST00000553527 TNFRSF10AO00220 468 aa25.88■■□□□ 1.73
TDP1-205ENST00000553527 PPP6R2O75170 966 aa25.88■■□□□ 1.73
TDP1-205ENST00000553527 TBCAO75347 108 aaKnown RBP25.88■■□□□ 1.73
TDP1-205ENST00000553527 MAPTP10636 758 aaKnown RBP25.88■■□□□ 1.73
TDP1-205ENST00000553527 PUS10Q3MIT2 529 aaKnown RBP25.88■■□□□ 1.73
TDP1-205ENST00000553527 PDILTQ8N807 584 aa25.88■■□□□ 1.73
TDP1-205ENST00000553527 CEP120Q8N960 986 aa25.88■■□□□ 1.73
TDP1-205ENST00000553527 VN1R2Q8NFZ6 395 aa25.88■■□□□ 1.73
TDP1-205ENST00000553527 COLEC11Q9BWP8 271 aa25.88■■□□□ 1.73
TDP1-205ENST00000553527 CDT1Q9H211 546 aa25.88■■□□□ 1.73
TDP1-205ENST00000553527 MARCH5Q9NX47 278 aa25.88■■□□□ 1.73
TDP1-205ENST00000553527 CITO14578 2027 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 C2CD2LO14523 706 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 THP07101 528 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 CTSAP10619 480 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 MATR3P43243 847 aaKnown RBP eCLIP25.87■■□□□ 1.73
TDP1-205ENST00000553527 TAS1R1Q7RTX1 841 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 HAUS6Q7Z4H7 955 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 BICD1Q96G01 975 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 SPATA32Q96LK8 384 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 SCAND2PQ9GZW5 306 aaPredicted RBP25.87■■□□□ 1.73
TDP1-205ENST00000553527 PARVGQ9HBI0 331 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 ANKFY1Q9P2R3 1169 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 STK17AQ9UEE5 414 aa25.87■■□□□ 1.73
TDP1-205ENST00000553527 CASTOR2A6NHX0 329 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 K7ENM7 598 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 PTGESO14684 152 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 TRAK2O60296 914 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 STAT6P42226 847 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 GLRA4Q5JXX5 417 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 CCDC73Q6ZRK6 1079 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 SV2BQ7L1I2 683 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 LEO1Q8WVC0 666 aaPredicted RBP25.86■■□□□ 1.73
TDP1-205ENST00000553527 PAAF1Q9BRP4 392 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 CCDC94Q9BW85 323 aaPredicted RBP25.86■■□□□ 1.73
TDP1-205ENST00000553527 APOL5Q9BWW9 433 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 PTPRHQ9HD43 1115 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 RCOR1Q9UKL0 485 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 FAM50BQ9Y247 325 aa25.86■■□□□ 1.73
TDP1-205ENST00000553527 TTC28Q96AY4 2481 aa25.85■■□□□ 1.73
TDP1-205ENST00000553527 H0YCG3 227 aa25.85■■□□□ 1.73
TDP1-205ENST00000553527 MBTPS2O43462 519 aa25.85■■□□□ 1.73
TDP1-205ENST00000553527 CLASP2O75122 1294 aaKnown RBP25.85■■□□□ 1.73
TDP1-205ENST00000553527 ME1P48163 572 aa25.85■■□□□ 1.73
TDP1-205ENST00000553527 YARSP54577 528 aaKnown RBP25.85■■□□□ 1.73
TDP1-205ENST00000553527 NCKAP1LP55160 1127 aa25.85■■□□□ 1.73
TDP1-205ENST00000553527 TUSC3Q13454 348 aa25.85■■□□□ 1.73
TDP1-205ENST00000553527 MPZL3Q6UWV2 235 aa25.85■■□□□ 1.73
TDP1-205ENST00000553527 MSLNLQ96KJ4 702 aa25.85■■□□□ 1.73
TDP1-205ENST00000553527 A0A087X0B3 334 aa25.84■■□□□ 1.73
TDP1-205ENST00000553527 TADA2AO75478 443 aa25.84■■□□□ 1.73
TDP1-205ENST00000553527 NMT1P30419 496 aaKnown RBP25.84■■□□□ 1.73
TDP1-205ENST00000553527 SEZ6Q53EL9 994 aa25.84■■□□□ 1.73
TDP1-205ENST00000553527 FAM178BQ8IXR5 827 aa25.84■■□□□ 1.73
TDP1-205ENST00000553527 HASPINQ8TF76 798 aa25.84■■□□□ 1.73
TDP1-205ENST00000553527 ZMYM2Q9UBW7 1377 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 NCOR1O75376 2440 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 FSD2A1L4K1 749 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 MYMKA6NI61 221 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 CUTAO60888 179 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 SRGAP2BP0DMP2 458 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 MCF2P10911 925 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 GRM5P41594 1212 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 ZNF131P52739 623 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 SMAD4Q13485 552 aaKnown RBP25.83■■□□□ 1.73
TDP1-205ENST00000553527 PTPN14Q15678 1187 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 DDX12PQ92771 950 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 B3GALT6Q96L58 329 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 ACAP3Q96P50 834 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 MRPL17Q9NRX2 175 aaKnown RBP25.83■■□□□ 1.73
TDP1-205ENST00000553527 TBX20Q9UMR3 447 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms