RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ZDHHC14Q8IZN3 488 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 MRPL43Q8N983 215 aaKnown RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 TDRD5Q8NAT2 981 aaKnown RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 NKD2Q969F2 451 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 PGBD1Q96JS3 809 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 ZNF558Q96NG5 402 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 SDF4Q9BRK5 362 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 MTA3Q9BTC8 594 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 ANO3Q9BYT9 981 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 PUF60Q9UHX1 559 aaKnown RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 MAP1BP46821 2468 aaKnown RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 MEIS1O00470 390 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 DHX15O43143 795 aaKnown RBP8.26□□□□□ -1.09
ATXN3-219ENST00000553488 SGSM2O43147 1006 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 PRC1O43663 620 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 VTNP04004 478 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 AOC1P19801 751 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 CHMLP26374 656 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 SREBF1P36956 1147 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 ID4P47928 161 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 GNAQP50148 359 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 AAMPQ13685 434 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 ZNF484Q5JVG2 852 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 RARS2Q5T160 578 aaKnown RBP8.26□□□□□ -1.09
ATXN3-219ENST00000553488 TTC22Q5TAA0 569 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 CES5AQ6NT32 575 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 KANK3Q6NY19 840 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 TMC7Q7Z402 723 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 TMEM173Q86WV6 379 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-219ENST00000553488 ECHDC2Q86YB7 292 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 CCDC105Q8IYK2 499 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 ADSSL1Q8N142 457 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 CCDC82Q8N4S0 544 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 C12orf76Q8N812 135 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-219ENST00000553488 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 CEP63Q96MT8 703 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 ZBP1Q9H171 429 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 ADAMTS10Q9H324 1103 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 RWDD1Q9H446 243 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-219ENST00000553488 SPG21Q9NZD8 308 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 USTQ9Y2C2 406 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 IRAK3Q9Y616 596 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 MYH15Q9Y2K3 1946 aa8.26□□□□□ -1.09
ATXN3-219ENST00000553488 IGLV3-22A0A075B6J6 115 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 FAM86B1E9PN63 330 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 DDX39AO00148 427 aaKnown RBP8.25□□□□□ -1.09
ATXN3-219ENST00000553488 PI15O43692 258 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 SIN3BO75182 1162 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 EOMESO95936 686 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 FAM86B2P0C5J1 330 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 EPCAMP16422 314 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 LIFRP42702 1097 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 CLCN3P51790 818 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 PCBP4P57723 403 aaKnown RBP8.25□□□□□ -1.09
ATXN3-219ENST00000553488 KRT17Q04695 432 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 FAM160B1Q5W0V3 765 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 LINC00114Q6XXX2 140 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 NIPA1Q7RTP0 329 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 HEATR3Q7Z4Q2 680 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 RAB11FIP4Q86YS3 637 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 TEX2Q8IWB9 1127 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 BEND7Q8N7W2 519 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-219ENST00000553488 SLC22A17Q8WUG5 538 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 BCL7CQ8WUZ0 217 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-219ENST00000553488 CRYGNQ8WXF5 182 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 MAP4K1Q92918 833 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 COL26A1Q96A83 441 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 VN1R3Q9BXE9 311 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 RIC8AQ9NPQ8 531 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 ZNF302Q9NR11 478 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 DZANK1Q9NVP4 752 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 DUSP12Q9UNI6 340 aa8.25□□□□□ -1.09
ATXN3-219ENST00000553488 TDRD15B5MCY1 1934 aaKnown RBP8.25□□□□□ -1.09
ATXN3-219ENST00000553488 USP24Q9UPU5 2620 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 A0A0U1RQF3 1178 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-219ENST00000553488 MED19A0JLT2 244 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-219ENST00000553488 ADARB2-AS1A8MUL3 147 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 CALM1P0DP23 149 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 CALM2P0DP24 149 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 CALM3P0DP25 149 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 DGKGP49619 791 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 METAP2P50579 478 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATXN3-219ENST00000553488 BCAR1P56945 870 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 AP3B2Q13367 1082 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 ANGPT1Q15389 498 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 CASC1Q6TDU7 716 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 SYT9Q86SS6 491 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 SGMS1Q86VZ5 419 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 ABI1Q8IZP0 508 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 HELQQ8TDG4 1101 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 AUTS2Q8WXX7 1259 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 TNFRSF25Q93038 417 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 RMDN1Q96DB5 314 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 TMEM87BQ96K49 555 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 PRIMPOLQ96LW4 560 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 MRPL9Q9BYD2 267 aaKnown RBP8.24□□□□□ -1.09
ATXN3-219ENST00000553488 MFSD1Q9H3U5 465 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms