RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 DNAJC7Q99615 494 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 TMEM117Q9H0C3 514 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 TMEM8AQ9HCN3 771 aa19.09■□□□□ 0.65
PSEN1-206ENST00000553447 CPSF3Q9UKF6 684 aaKnown RBP19.09■□□□□ 0.65
PSEN1-206ENST00000553447 RALGAPA2Q2PPJ7 1873 aa19.08■□□□□ 0.65
PSEN1-206ENST00000553447 A0A1B0GUA9 196 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 DLATP10515 647 aaKnown RBP19.08■□□□□ 0.64
PSEN1-206ENST00000553447 ACTN1P12814 892 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 TNFSF9P41273 254 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 CLDN10P78369 228 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 APBA1Q02410 837 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 CETN1Q12798 172 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 PTGISQ16647 500 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 KLHDC7AQ5VTJ3 777 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 TRIM65Q6PJ69 517 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 CATSPER4Q7RTX7 472 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 CACNA2D4Q7Z3S7 1137 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 RPAINQ86UA6 219 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 KIAA1524Q8TCG1 905 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 BAP1Q92560 729 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 FNBP1Q96RU3 617 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 POP1Q99575 1024 aaKnown RBP19.08■□□□□ 0.64
PSEN1-206ENST00000553447 NAA15Q9BXJ9 866 aaKnown RBP19.08■□□□□ 0.64
PSEN1-206ENST00000553447 CELF4Q9BZC1 486 aaKnown RBP19.08■□□□□ 0.64
PSEN1-206ENST00000553447 INTS2Q9H0H0 1204 aaKnown RBP19.08■□□□□ 0.64
PSEN1-206ENST00000553447 SIX2Q9NPC8 291 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 PAK6Q9NQU5 681 aaPredicted RBP19.08■□□□□ 0.64
PSEN1-206ENST00000553447 TOPORSQ9NS56 1045 aaPredicted RBP19.08■□□□□ 0.64
PSEN1-206ENST00000553447 PHF24Q9UPV7 400 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 TRPV2Q9Y5S1 764 aa19.08■□□□□ 0.64
PSEN1-206ENST00000553447 CITO14578 2027 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 A0A1W2PQ45 241 aaPredicted RBP19.07■□□□□ 0.64
PSEN1-206ENST00000553447 A0A1W2PQY0 241 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 M0QZ92 97 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 TULP1O00294 542 aaPredicted RBP19.07■□□□□ 0.64
PSEN1-206ENST00000553447 WNT7BP56706 349 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 POLR2FP61218 127 aaKnown RBP19.07■□□□□ 0.64
PSEN1-206ENST00000553447 EPC2Q52LR7 807 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 KRT39Q6A163 491 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 THNSL1Q8IYQ7 743 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 EHBP1Q8NDI1 1231 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 LMO3Q8TAP4 145 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 TMEM40Q8WWA1 233 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 WNT8BQ93098 351 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 CGRRF1Q99675 332 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 PDE11AQ9HCR9 933 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 FBXL5Q9UKA1 691 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 CDY2AQ9Y6F7 541 aa19.07■□□□□ 0.64
PSEN1-206ENST00000553447 KBTBD13C9JR72 458 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 NCBP1Q09161 790 aaKnown RBP19.06■□□□□ 0.64
PSEN1-206ENST00000553447 MTFR1Q15390 333 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 SURF1Q15526 300 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 KYAT1Q16773 422 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 TSR1Q2NL82 804 aaKnown RBP19.06■□□□□ 0.64
PSEN1-206ENST00000553447 PDXDC1Q6P996 788 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 C15orf39Q6ZRI6 1047 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 CEP120Q8N960 986 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 ADPGKQ9BRR6 497 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 NLRC4Q9NPP4 1024 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 COQ4Q9Y3A0 265 aa19.06■□□□□ 0.64
PSEN1-206ENST00000553447 LRRC53A6NM62 1247 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 ARHGAP6O43182 974 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 CCL5P13501 91 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 UCHL3P15374 230 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 TNNI1P19237 187 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 AXLP30530 894 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 HOXA11P31270 313 aaPredicted RBP19.05■□□□□ 0.64
PSEN1-206ENST00000553447 KCNJ6P48051 423 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 PTK7Q13308 1070 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 DCAF4L1Q3SXM0 396 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 NOTUMQ6P988 496 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 SV2AQ7L0J3 742 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 RRAGAQ7L523 313 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 APBB1IPQ7Z5R6 666 aaPredicted RBP19.05■□□□□ 0.64
PSEN1-206ENST00000553447 TMTC1Q8IUR5 882 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 SLC43A3Q8NBI5 491 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 ZNF516Q92618 1163 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 NUCKS1Q9H1E3 243 aaKnown RBP19.05■□□□□ 0.64
PSEN1-206ENST00000553447 STARD7Q9NQZ5 370 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 DAAM1Q9Y4D1 1078 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 FHOD1Q9Y613 1164 aa19.05■□□□□ 0.64
PSEN1-206ENST00000553447 PTPRJQ12913 1337 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 A0A0U1RQG5 324 aaPredicted RBP19.04■□□□□ 0.64
PSEN1-206ENST00000553447 DNM1LO00429 736 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 C4BPAP04003 597 aaKnown RBP19.04■□□□□ 0.64
PSEN1-206ENST00000553447 CLTAP09496 248 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 STAG3L1P0CL83 205 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 HSPA8P11142 646 aaKnown RBP19.04■□□□□ 0.64
PSEN1-206ENST00000553447 HNRNPH3P31942 346 aaKnown RBP19.04■□□□□ 0.64
PSEN1-206ENST00000553447 OSTNP61366 133 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 POU5F1Q01860 360 aaKnown RBP19.04■□□□□ 0.64
PSEN1-206ENST00000553447 MGAT3Q09327 533 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 ENOX2Q16206 610 aaKnown RBP19.04■□□□□ 0.64
PSEN1-206ENST00000553447 MEA1Q16626 185 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 ZACNQ401N2 412 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 LMBRD2Q68DH5 695 aaPredicted RBP19.04■□□□□ 0.64
PSEN1-206ENST00000553447 IQCEQ6IPM2 695 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 SLC27A1Q6PCB7 646 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 WDR59Q6PJI9 974 aa19.04■□□□□ 0.64
PSEN1-206ENST00000553447 CYP26C1Q6V0L0 522 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms