RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 GDF11O95390 407 aa18.78■□□□□ 0.6
SYNE3-202ENST00000553340 BRAFP15056 766 aa18.78■□□□□ 0.6
SYNE3-202ENST00000553340 MKRN3Q13064 507 aaKnown RBP18.78■□□□□ 0.6
SYNE3-202ENST00000553340 RHBDF2Q6PJF5 856 aa18.78■□□□□ 0.6
SYNE3-202ENST00000553340 SNF8Q96H20 258 aa18.78■□□□□ 0.6
SYNE3-202ENST00000553340 MLXIPLQ9NP71 852 aa18.78■□□□□ 0.6
SYNE3-202ENST00000553340 PRR12Q9ULL5 1215 aa18.78■□□□□ 0.6
SYNE3-202ENST00000553340 CYP26A1O43174 497 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 GYS1P13807 737 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 TRAF1Q13077 416 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 DAW1Q8N136 415 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 LXNQ9BS40 222 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 BATF3Q9NR55 127 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 ARHGEF3Q9NR81 526 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 LARSQ9P2J5 1176 aaKnown RBP18.77■□□□□ 0.6
SYNE3-202ENST00000553340 STX2P32856 288 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 CHKAP35790 457 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 MXI1P50539 228 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 SNX1Q13596 522 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 ALCAMQ13740 583 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 SYDE1Q6ZW31 735 aaPredicted RBP18.77■□□□□ 0.6
SYNE3-202ENST00000553340 SLC47A2Q86VL8 602 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 PPM1KQ8N3J5 372 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 GDAP1Q8TB36 358 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 PSPC1Q8WXF1 523 aaKnown RBP18.77■□□□□ 0.6
SYNE3-202ENST00000553340 ZDHHC15Q96MV8 337 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 ZNF577Q9BSK1 485 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 UNC45AQ9H3U1 944 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 CTNNAL1Q9UBT7 734 aa18.77■□□□□ 0.6
SYNE3-202ENST00000553340 TISP43B9A030 160 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 G3V3G9 751 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 MAN1A1P33908 653 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 FMO1Q01740 532 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 MKRN4PQ13434 485 aaPredicted RBP18.76■□□□□ 0.59
SYNE3-202ENST00000553340 LLGL1Q15334 1064 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 CEP55Q53EZ4 464 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 C1orf220Q5T0J3 134 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 DCAF8Q5TAQ9 597 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 FITM2Q8N6M3 262 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 TGS1Q96RS0 853 aaKnown RBP18.76■□□□□ 0.59
SYNE3-202ENST00000553340 CBWD1Q9BRT8 395 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 PRKAG3Q9UGI9 489 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 SIPA1L1O43166 1804 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 THAP12O43422 761 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 KRT16P08779 473 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 MFAP3P55082 362 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 CAV1Q03135 178 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 ZKSCAN8Q15776 578 aaPredicted RBP18.76■□□□□ 0.59
SYNE3-202ENST00000553340 KYNUQ16719 465 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 FAM182BQ5T319 152 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 ARHGEF18Q6ZSZ5 1173 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 C12orf56Q8IXR9 622 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 KIF2BQ8N4N8 673 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 TMEM174Q8WUU8 243 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 ACCSQ96QU6 501 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 ACP6Q9NPH0 428 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 KLHL14Q9P2G3 628 aa18.76■□□□□ 0.59
SYNE3-202ENST00000553340 LRRC37AA6NMS7 1700 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 TCEA3O75764 348 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 GAS8O95995 478 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 POLR2MP0CAP2 368 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 MSH2P43246 934 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 UBXN2AP68543 259 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 PADI6Q6TGC4 694 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 NSMFQ6X4W1 530 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 MAEAQ7L5Y9 396 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 GRK7Q8WTQ7 553 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 MAIP1Q8WWC4 291 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 TEKT3Q9BXF9 490 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 TRIM7Q9C029 511 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 TMEM117Q9H0C3 514 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 HSPBP1Q9NZL4 362 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 PNMA3Q9UL41 463 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 STK38LQ9Y2H1 464 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 GH1P01241 217 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 PDE6BP35913 854 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 ITGA8P53708 1063 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 PTK6Q13882 451 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 MPP2Q14168 576 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 ASRGL1Q7L266 308 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 SH3BP5LQ7L8J4 393 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 KIRREL3Q8IZU9 778 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 C7orf43Q8WVR3 580 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 PRCCQ92733 491 aaPredicted RBP18.75■□□□□ 0.59
SYNE3-202ENST00000553340 MAGEB18Q96M61 343 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 KREMEN1Q96MU8 473 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 EHMT1Q9H9B1 1298 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.75■□□□□ 0.596e-9■■■■■ 134.6
SYNE3-202ENST00000553340 NKIRAS1Q9NYS0 192 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 FAM198AQ9UFP1 575 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 USP20Q9Y2K6 914 aa18.75■□□□□ 0.59
SYNE3-202ENST00000553340 PMM2O15305 246 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 MAPTP10636 758 aaKnown RBP18.74■□□□□ 0.59
SYNE3-202ENST00000553340 CYP11B1P15538 503 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 LACTBP83111 547 aaPredicted RBP18.74■□□□□ 0.59
SYNE3-202ENST00000553340 VPS72Q15906 364 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 SHC3Q92529 594 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 TRAIPQ9BWF2 469 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 IDI2Q9BXS1 227 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms