RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 ANO5Q75V66 913 aa12.21□□□□□ -0.45
SYNE2-208ENST00000553289 POLR3CQ9BUI4 534 aaPredicted RBP12.21□□□□□ -0.45
SYNE2-208ENST00000553289 HSPBP1Q9NZL4 362 aa12.21□□□□□ -0.45
SYNE2-208ENST00000553289 PIK3R2O00459 728 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 CYP2C19P33261 490 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 ARSEP51690 589 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 CDH6P55285 790 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 E4F1Q66K89 784 aaPredicted RBP12.21□□□□□ -0.46
SYNE2-208ENST00000553289 ZNF34Q8IZ26 560 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 PITPNM2Q9BZ72 1349 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 MXD4Q14582 209 aaPredicted RBP12.21□□□□□ -0.46
SYNE2-208ENST00000553289 NCAPHQ15003 741 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 STRIP1Q5VSL9 837 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 EP400NLQ6ZTU2 488 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 SYN2Q92777 582 aaPredicted RBP12.21□□□□□ -0.46
SYNE2-208ENST00000553289 DPF2Q92785 391 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 MTBPQ96DY7 904 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 TSC22D3Q99576 134 aa12.21□□□□□ -0.46
SYNE2-208ENST00000553289 DHX35Q9H5Z1 703 aaKnown RBP12.21□□□□□ -0.46
SYNE2-208ENST00000553289 FLT1P17948 1338 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 FMO5P49326 533 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 VSNL1P62760 191 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 NAB2Q15742 525 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 FASTKD5Q7L8L6 764 aaKnown RBP12.2□□□□□ -0.46
SYNE2-208ENST00000553289 SCN4BQ8IWT1 228 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 NCLNQ969V3 563 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 FAM129AQ9BZQ8 928 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 ECT2Q9H8V3 914 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 ANLNQ9NQW6 1124 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 MRGBPQ9NV56 204 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 AMACRQ9UHK6 382 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 CFAP69A5D8W1 941 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 PI4K2BG5E9Z4 385 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 PPP1R37O75864 691 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 TYK2P29597 1187 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 TRADDQ15628 312 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 ELMOD1Q8N336 334 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 ULK4Q96C45 1275 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 ETNK1Q9HBU6 452 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 PSMD14O00487 310 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 CYP26A1O43174 497 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 UCHL3P15374 230 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 AP1B1Q10567 949 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 NFIXQ14938 502 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 C16orf86Q6ZW13 317 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 CDC26Q8NHZ8 85 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 C1orf54Q8WWF1 131 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 SNX19Q92543 992 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 SP110Q9HB58 689 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 DAGLAQ9Y4D2 1042 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 CDH16O75309 829 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 NMT1P30419 496 aaKnown RBP12.2□□□□□ -0.46
SYNE2-208ENST00000553289 PRAMEP78395 509 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 CDK17Q00537 523 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 FMR1Q06787 632 aaKnown RBP eCLIP12.2□□□□□ -0.46
SYNE2-208ENST00000553289 IMPG1Q17R60 797 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 ICE2Q659A1 982 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 HHIPL2Q6UWX4 724 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 ARHGAP18Q8N392 663 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 CATSPER1Q8NEC5 780 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 C18orf8Q96DM3 657 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 LRRC1Q9BTT6 524 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 EML4Q9HC35 981 aaKnown RBP12.2□□□□□ -0.46
SYNE2-208ENST00000553289 ARL2BPQ9Y2Y0 163 aa12.2□□□□□ -0.46
SYNE2-208ENST00000553289 E2F6O75461 281 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 PRKCBP05771 671 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 MDH1P40925 334 aaKnown RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 EIF3EP60228 445 aaKnown RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 PIGHQ14442 188 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 MTF1Q14872 753 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 AGBL2Q5U5Z8 902 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 TRAPPC11Q7Z392 1133 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 CCNYL1Q8N7R7 359 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 CEP19Q96LK0 163 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 EPAS1Q99814 870 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 SENP7Q9BQF6 1050 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 DIAPH2O60879 1101 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 SPAG6O75602 509 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 STAT5BP51692 787 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 NSUN2Q08J23 767 aaKnown RBP eCLIP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 PARP9Q8IXQ6 854 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 THOC1Q96FV9 657 aaKnown RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 PPP1R2P1Q96PQ5 205 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 TEX12Q9BXU0 123 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 OLA1Q9NTK5 396 aaKnown RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 STXBP3O00186 592 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 SERPINB9P50453 376 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 TBCCQ15814 346 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 SLC35G2Q8TBE7 412 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 SGSM3Q96HU1 749 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 EPN3Q9H201 632 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 DCTN4Q9UJW0 460 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 AARSP49588 968 aaKnown RBP eCLIP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■■■ 29.2
SYNE2-208ENST00000553289 HSD17B4P51659 736 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms