RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 BTKQ06187 659 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 STK3Q13188 491 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 UBE3CQ15386 1083 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 ABHD15Q6UXT9 468 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 Q6ZVL8 140 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 TAS1R1Q7RTX1 841 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 COL23A1Q86Y22 540 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-209ENST00000553280 ZDHHC14Q8IZN3 488 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 SNX33Q8WV41 574 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 CYFIP2Q96F07 1278 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 CLPTM1LQ96KA5 538 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 FAM167AQ96KS9 214 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 MRGPRX4Q96LA9 322 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 GORASP1Q9BQQ3 440 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 C22orf23Q9BZE7 217 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 BTBD1Q9H0C5 482 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 MANSC1Q9H8J5 431 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 ATP6V0A4Q9HBG4 840 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 TRMT13Q9NUP7 481 aaKnown RBP6.23□□□□□ -1.41
SCFD1-209ENST00000553280 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 DNAI1Q9UI46 699 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 SIK3Q9Y2K2 1263 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 LRRC14BA6NHZ5 514 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 RHPN2P1A8MT19 583 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 KNG1P01042 644 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 FGAP02671 866 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
SCFD1-209ENST00000553280 ADSLP30566 484 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-209ENST00000553280 SLC6A9P48067 706 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 RAPGEF1Q13905 1077 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 EIF4HQ15056 248 aaKnown RBP6.22□□□□□ -1.41
SCFD1-209ENST00000553280 MST1LQ2TV78 715 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 TMEM95Q3KNT9 176 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 OTOP2Q7RTS6 562 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 STK32CQ86UX6 486 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 UNC5BQ8IZJ1 945 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 ADGRG2Q8IZP9 1017 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 TTLL6Q8N841 843 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 PPM1EQ8WY54 764 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 ANKS1AQ92625 1134 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 RIPOR3Q96MK2 946 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 SAMD11Q96NU1 681 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 NT5C1BQ96P26 610 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 HERPUD2Q9BSE4 406 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 C11orf84Q9BUA3 381 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-209ENST00000553280 LRRC27Q9C0I9 530 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 XYLT2Q9H1B5 865 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 ARMT1Q9H993 441 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 CALCOCO1Q9P1Z2 691 aa6.22□□□□□ -1.41
SCFD1-209ENST00000553280 H0Y858 1186 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 H3BUI4 141 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 PRRG2O14669 202 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 FFAR3O14843 346 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 PHGDHO43175 533 aaKnown RBP6.21□□□□□ -1.42
SCFD1-209ENST00000553280 CYP7B1O75881 506 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 HNRNPLP14866 589 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCFD1-209ENST00000553280 TYRP1P17643 537 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 PAX3P23760 479 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 ECHS1P30084 290 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 ADCY8P40145 1251 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 CASP5P51878 434 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 TARDBPQ13148 414 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCFD1-209ENST00000553280 RAB39AQ14964 217 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 KHDC1Q4VXA5 237 aaKnown RBP6.21□□□□□ -1.42
SCFD1-209ENST00000553280 HEATR3Q7Z4Q2 680 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 OR2C3Q8N628 320 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 LINC00482Q8N8I6 264 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 LINC01356Q8N9X3 169 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 KYQ8NBH2 561 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 TP53I13Q8NBR0 393 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-209ENST00000553280 MTFMTQ96DP5 389 aaKnown RBP6.21□□□□□ -1.42
SCFD1-209ENST00000553280 ZMAT3Q9HA38 289 aaKnown RBP6.21□□□□□ -1.42
SCFD1-209ENST00000553280 BCO1Q9HAY6 547 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 LMBRD1Q9NUN5 540 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 CDC42EP3Q9UKI2 254 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 VWA7Q9Y334 891 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 PCDHA3Q9Y5H8 950 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 PMF1-BGLAPU3KQ54 211 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 NCANO14594 1321 aa6.21□□□□□ -1.42
SCFD1-209ENST00000553280 A0A1B0GTL3 188 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 F5H423 210 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-209ENST00000553280 FOXN3O00409 490 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-209ENST00000553280 DAPK3O43293 454 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 PRAMEF4O60810 478 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 COL6A1P12109 1028 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 TYRP14679 529 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 SYN1P17600 705 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 PLS1Q14651 629 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 DGKKQ5KSL6 1271 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 ANO1Q5XXA6 986 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 APBB1IPQ7Z5R6 666 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-209ENST00000553280 RSPH3Q86UC2 560 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 PIK3C3Q8NEB9 887 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 MYRIPQ8NFW9 859 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 IL31RAQ8NI17 732 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 GFM2Q969S9 779 aaKnown RBP6.2□□□□□ -1.42
SCFD1-209ENST00000553280 SLC35A4Q96G79 324 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 ZSWIM3Q96MP5 696 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 UBA5Q9GZZ9 404 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms