RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 GGPS1O95749 300 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 ITGA4P13612 1032 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 ATP5DP30049 168 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 CA8P35219 290 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 JAM2P57087 298 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 CYP4A11Q02928 519 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 ZNF268Q14587 947 aaPredicted RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 ZNF394Q53GI3 561 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 FAM83AQ86UY5 434 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 NIM1KQ8IY84 436 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 ATP8B4Q8TF62 1192 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 CTNNBL1Q8WYA6 563 aaPredicted RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 ANKRD27Q96NW4 1050 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 REEP2Q9BRK0 252 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 RUSC1Q9BVN2 902 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 MYOZ2Q9NPC6 264 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 HOMER3Q9NSC5 361 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 ZDHHC18Q9NUE0 388 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 WRAP73Q9P2S5 460 aaPredicted RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 TRPC6Q9Y210 931 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 CEP350Q5VT06 3117 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 SYNGAP1Q96PV0 1343 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 MIF4GDA9UHW6 222 aaKnown RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 PPP1R12BO60237 982 aaPredicted RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 CFBP00751 764 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 BDNFP23560 247 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 RPA1P27694 616 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 CHRNA3P32297 505 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 PABPC4Q13310 644 aaKnown RBP eCLIP7.88□□□□□ -1.15
BEST3-212ENST00000553096 NAA25Q14CX7 972 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 EPHA7Q15375 998 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 KNOP1Q1ED39 458 aaKnown RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 DPY19L2P1Q6NXN4 242 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 U2AF1L4Q8WU68 220 aaKnown RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 CENPOQ9BU64 300 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 ROPN1BQ9BZX4 212 aaPredicted RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 ROPN1Q9HAT0 212 aaPredicted RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 RGL1Q9NZL6 768 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 COL20A1Q9P218 1284 aa7.88□□□□□ -1.15
BEST3-212ENST00000553096 ZNFX1Q9P2E3 1918 aaKnown RBP7.88□□□□□ -1.15
BEST3-212ENST00000553096 DCDC2CA8MYV0 355 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 O00370 1275 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 ZBTB39O15060 712 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 PSMD10O75832 226 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 FOSP01100 380 aaPredicted RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 ACTN1P12814 892 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 ALADP13716 330 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 SLC9A1P19634 815 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 CCND1P24385 295 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 C9orf131Q5VYM1 1079 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 EPM2AIP1Q7L775 607 aaPredicted RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 SYT2Q8N9I0 419 aaPredicted RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 ZNF784Q8NCA9 323 aaPredicted RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 ARMC2Q8NEN0 867 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 ERMNQ8TAM6 284 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 MDM1Q8TC05 714 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 RSPH1Q8WYR4 309 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 DHRS1Q96LJ7 313 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 EIF2AK1Q9BQI3 630 aaKnown RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 TRIM51Q9BSJ1 452 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 CELF4Q9BZC1 486 aaKnown RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 NACA2Q9H009 215 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 IKZF4Q9H2S9 585 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 TYW1Q9NV66 732 aaKnown RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 RNF181Q9P0P0 153 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 C15orf41Q9Y2V0 281 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 ZMYM2Q9UBW7 1377 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 DDX3XO00571 662 aaKnown RBP eCLIP7.87□□□□□ -1.15
BEST3-212ENST00000553096 LIN7AO14910 233 aaPredicted RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 DDX3YO15523 660 aaKnown RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 CREB3O43889 395 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 PLA2G6O60733 806 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 PHF2O75151 1096 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 SUN1O94901 812 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 VIMP08670 466 aaKnown RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 NQO1P15559 274 aaKnown RBP7.87□□□□□ -1.15
BEST3-212ENST00000553096 GALCP54803 685 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 MAPK7Q13164 816 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 SFR1Q86XK3 245 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 JAMLQ86YT9 394 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 RHOT2Q8IXI1 618 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 LRRC34Q8IZ02 419 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 UBL4BQ8N7F7 174 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 SLC5A5Q92911 643 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 AGBL1Q96MI9 1066 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 VPS33BQ9H267 617 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 N6AMT1Q9Y5N5 214 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 PCNTO95613 3336 aa7.87□□□□□ -1.15
BEST3-212ENST00000553096 PFASO15067 1338 aa7.86□□□□□ -1.15
BEST3-212ENST00000553096 BACH1O14867 736 aa7.86□□□□□ -1.15
BEST3-212ENST00000553096 RTN2O75298 545 aa7.86□□□□□ -1.15
BEST3-212ENST00000553096 LUC7L3O95232 432 aaKnown RBP7.86□□□□□ -1.15
BEST3-212ENST00000553096 CLTAP09496 248 aa7.86□□□□□ -1.15
BEST3-212ENST00000553096 ARP10275 920 aa7.86□□□□□ -1.15
BEST3-212ENST00000553096 HADHBP55084 474 aaKnown RBP7.86□□□□□ -1.15
BEST3-212ENST00000553096 PSMC1P62191 440 aaKnown RBP7.86□□□□□ -1.15
BEST3-212ENST00000553096 PPATQ06203 517 aa7.86□□□□□ -1.15
BEST3-212ENST00000553096 MKRN3Q13064 507 aaKnown RBP7.86□□□□□ -1.15
BEST3-212ENST00000553096 CTTNQ14247 550 aaKnown RBP7.86□□□□□ -1.15
BEST3-212ENST00000553096 PLS1Q14651 629 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms