RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 KLF6Q99612 283 aaPredicted RBP12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 SH3GL3Q99963 347 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 ZFP69BQ9UJL9 534 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 EDIL3O43854 480 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 SPATA31C1P0DKV0 1188 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 TROVE2P10155 538 aaKnown RBP eCLIP12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 PLS3P13797 630 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 JAM2P57087 298 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 SLC47A2Q86VL8 602 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 PASD1Q8IV76 773 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 CKAP2Q8WWK9 683 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 RBM15Q96T37 977 aaKnown RBP eCLIP12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 PHTF1Q9UMS5 762 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 IKBKGQ9Y6K9 419 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 FAM47DPA6NHR8 397 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 PIAS1O75925 651 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 BAG2O95816 211 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 ITIH2P19823 946 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 PTGIRP43119 386 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 MFAP3P55082 362 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 SP4Q02446 784 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 SLC30A9Q6PML9 568 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 EPB41L4BQ9H329 900 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 TRABDQ9H4I3 376 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 UBN1Q9NPG3 1134 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 CICQ96RK0 1608 aaPredicted RBP12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 ENTPD5O75356 428 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 AP1G2O75843 785 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 FOSP01100 380 aaPredicted RBP12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 CD58P19256 250 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 DRG2P55039 364 aaKnown RBP12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 CYFIP1Q7L576 1253 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 ZNF577Q9BSK1 485 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 USH1CQ9Y6N9 552 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 EME2A4GXA9 379 aaPredicted RBP12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 GGPS1O95749 300 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 SHROOM1Q2M3G4 852 aaPredicted RBP12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 ECHDC2Q86YB7 292 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 PDCD7Q8N8D1 485 aaKnown RBP12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 NACC1Q96RE7 527 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 KCNMB3Q9NPA1 279 aa12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.35□□□□□ -0.43
PPFIA2-227ENST00000552948 ZNF335Q9H4Z2 1342 aaPredicted RBP12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 GTPBP10A4D1E9 387 aaKnown RBP12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 F5H6K3 240 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 DCTN3O75935 186 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 ATP2B4P23634 1241 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 RCN2Q14257 317 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 FOXR2Q6PJQ5 311 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 CPA5Q8WXQ8 436 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 DNAJC9Q8WXX5 260 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 CBWD1Q9BRT8 395 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 TRIM4Q9C037 500 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 NCANO14594 1321 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 GNAT1P11488 350 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 BMP3P12645 472 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 RHBDL3P58872 404 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 CDR2Q01850 454 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 RASA3Q14644 834 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 RASIP1Q5U651 963 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 TEKT4Q8WW24 435 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 MAIP1Q8WWC4 291 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 NT5C1BQ96P26 610 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 IQCGQ9H095 443 aaKnown RBP12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 DDX4Q9NQI0 724 aaKnown RBP12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 O00370 1275 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 UNC5CO95185 931 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 KLC1Q07866 573 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 CCDC62Q6P9F0 684 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 ANKMY2Q8IV38 441 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 CCDC89Q8N998 374 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 DHX38Q92620 1227 aaKnown RBP12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 ART4Q93070 314 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 L3MBTL3Q96JM7 780 aaPredicted RBP12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 MAGEB18Q96M61 343 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 GBP5Q96PP8 586 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 TRAIPQ9BWF2 469 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 TMEM117Q9H0C3 514 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 NINJ2Q9NZG7 142 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 SERPINA10Q9UK55 444 aa12.34□□□□□ -0.43
PPFIA2-227ENST00000552948 CCDC189A1A4V9 331 aa12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 RALAP11233 206 aa12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 PEX3P56589 373 aa12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 MKRN3Q13064 507 aaKnown RBP12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 P3H1Q32P28 736 aa12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 HYIQ5T013 277 aa12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 VSTM1Q6UX27 236 aa12.33□□□□□ -0.44
PPFIA2-227ENST00000552948 MIER3Q7Z3K6 550 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms