RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 KCND2Q9NZV8 630 aa12.54□□□□□ -0.4
TMEM116-218ENST00000552839 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.53□□□□□ -0.4
TMEM116-218ENST00000552839 ZNF202O95125 648 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 IDEP14735 1019 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 AOC1P19801 751 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 AFMP43652 599 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 ALDH7A1P49419 539 aaKnown RBP12.53□□□□□ -0.4
TMEM116-218ENST00000552839 TFDP1Q14186 410 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 KCNK18Q7Z418 384 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 ZNF598Q86UK7 904 aaKnown RBP12.53□□□□□ -0.4
TMEM116-218ENST00000552839 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
TMEM116-218ENST00000552839 VPS52Q8N1B4 723 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 LINC01465Q8N7H1 131 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 SYT2Q8N9I0 419 aaPredicted RBP12.53□□□□□ -0.4
TMEM116-218ENST00000552839 SLC22A17Q8WUG5 538 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 PSPC1Q8WXF1 523 aaKnown RBP12.53□□□□□ -0.4
TMEM116-218ENST00000552839 TIPINQ9BVW5 301 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 ZBP1Q9H171 429 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 POLR3FQ9H1D9 316 aaPredicted RBP12.53□□□□□ -0.4
TMEM116-218ENST00000552839 DZANK1Q9NVP4 752 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
TMEM116-218ENST00000552839 A0A087X0B3 334 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 MAFO75444 373 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-218ENST00000552839 SLFN14P0C7P3 912 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 FGFR4P22455 802 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.41
TMEM116-218ENST00000552839 MCM4P33991 863 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 DMP1Q13316 513 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-218ENST00000552839 BMS1Q14692 1282 aaKnown RBP12.52□□□□□ -0.41
TMEM116-218ENST00000552839 PPP2R5AQ15172 486 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 ANGPT1Q15389 498 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 TMC5Q6UXY8 1006 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 RHPN2Q8IUC4 686 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 CCDC105Q8IYK2 499 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 KIFAP3Q92845 792 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 SYAP1Q96A49 352 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-218ENST00000552839 TMEM143Q96AN5 459 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 TMEM169Q96HH4 297 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 NLRP4Q96MN2 994 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 RUSC1Q9BVN2 902 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 BLOC1S4Q9NUP1 217 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 SUCLA2Q9P2R7 463 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-218ENST00000552839 HPSEQ9Y251 543 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 IRAK3Q9Y616 596 aa12.52□□□□□ -0.41
TMEM116-218ENST00000552839 LRRIQ4A6NIV6 560 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 HIP1RO75146 1068 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 CTSAP10619 480 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 DARSP14868 501 aaKnown RBP12.51□□□□□ -0.41
TMEM116-218ENST00000552839 CYP11B2P19099 503 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-218ENST00000552839 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
TMEM116-218ENST00000552839 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 KRBA2Q6ZNG9 492 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 ZBTB8OSQ8IWT0 167 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 CCDC65Q8IXS2 484 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 DTWD2Q8NBA8 298 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 DEPTORQ8TB45 409 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 STAMQ92783 540 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 RTP3Q9BQQ7 232 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
TMEM116-218ENST00000552839 DACT1Q9NYF0 836 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 DUSP12Q9UNI6 340 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 VPS13AQ96RL7 3174 aa12.51□□□□□ -0.41
TMEM116-218ENST00000552839 FANCMQ8IYD8 2048 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 FAM237AA0A1B0GTK4 181 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 CCDC169A6NNP5 214 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 ZC3H11AO75152 810 aaKnown RBP eCLIP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 NR1I2O75469 434 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 CSDE1O75534 798 aaKnown RBP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 STBD1O95210 358 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 SMC2O95347 1197 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 LIG1P18858 919 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 GUCY2CP25092 1073 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 GPC3P51654 580 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 SMTNP53814 917 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 CDC42EP1Q00587 391 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 TDGQ13569 410 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 GIT2Q14161 759 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 MXD4Q14582 209 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 E2F4Q16254 413 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 LONRF3Q496Y0 759 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 GPR149Q86SP6 731 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 DDX53Q86TM3 631 aaKnown RBP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 SIX5Q8N196 739 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 ZNF710Q8N1W2 664 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 MYCT1Q8N699 235 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 BCL7CQ8WUZ0 217 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 DDX12PQ92771 950 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 ACSF2Q96CM8 615 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 RMDN1Q96DB5 314 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 IGSF21Q96ID5 467 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 REEP2Q9BRK0 252 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 DHX33Q9H6R0 707 aaKnown RBP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 NRDE2Q9H7Z3 1164 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms