RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 CDCA2Q69YH5 1023 aaPredicted RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 PDE12Q6L8Q7 609 aaKnown RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 AGMOQ6ZNB7 445 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 CCDC73Q6ZRK6 1079 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 C1orf186Q6ZWK4 172 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 SV2BQ7L1I2 683 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 KCNK18Q7Z418 384 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 RBM23Q86U06 439 aaKnown RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 ZNF598Q86UK7 904 aaKnown RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 GPBP1Q86WP2 473 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 MYCT1Q8N699 235 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 SPPL3Q8TCT6 385 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 BSNDQ8WZ55 320 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 MRPS27Q92552 414 aaKnown RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 LARP4BQ92615 738 aaKnown RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 RAD54LQ92698 747 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 BICD1Q96G01 975 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 USP28Q96RU2 1077 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 MMTAG2Q9BU76 263 aaKnown RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 RUSC1Q9BVN2 902 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 EIF2AQ9BY44 585 aaKnown RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 MRPL4Q9BYD3 311 aaKnown RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 FZD8Q9H461 694 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 CWH43Q9H720 699 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 TLE6Q9H808 572 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 UBE2ZQ9H832 354 aaPredicted RBP6.49□□□□□ -1.37
CCDC65-204ENST00000552188 C17orf75Q9HAS0 396 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 TLR9Q9NR96 1032 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 RNF19AQ9NV58 838 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 TBC1D13Q9NVG8 400 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 KLK14Q9P0G3 267 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 CFAP45Q9UL16 551 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 FAM50BQ9Y247 325 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 FAN1Q9Y2M0 1017 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 GIT1Q9Y2X7 761 aa6.49□□□□□ -1.37
CCDC65-204ENST00000552188 MTCL1Q9Y4B5 1905 aaKnown RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 NPHP3-ACAD11A0A0J9YXS1 232 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 A0A1B0GUA9 196 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 FSD2A1L4K1 749 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 MEIS3P2A8K0S8 358 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 SPTLC2O15270 562 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 B4GALT5O43286 388 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 F13A1P00488 732 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 HARSP12081 509 aaKnown RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 PLS3P13797 630 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 ATF7P17544 494 aaPredicted RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 PLCG1P19174 1290 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 KCNA5P22460 613 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 AKAP5P24588 427 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 HOXA11P31270 313 aaPredicted RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 DDIT3P35638 169 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 PBX3P40426 434 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 MLH1P40692 756 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 STAT6P42226 847 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 NPTX2P47972 431 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 NRIP1P48552 1158 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 SCNN1GP51170 649 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 YARSP54577 528 aaKnown RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 SLC12A3P55017 1021 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 PLCB3Q01970 1234 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 TFF2Q03403 129 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 GRIN1Q05586 938 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 SMC1AQ14683 1233 aaKnown RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 PTPAQ15257 358 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 FAM187BQ17R55 369 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 ZNF568Q3ZCX4 644 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 TMEM119Q4V9L6 283 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 LRRC55Q6ZSA7 311 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 ZBTB33Q86T24 672 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 SMG8Q8ND04 991 aaKnown RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 PABPC5Q96DU9 382 aaKnown RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 EPSTI1Q96J88 318 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 CLIC6Q96NY7 704 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 ASB2Q96Q27 587 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 GAD1Q99259 594 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 TCF25Q9BQ70 676 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 TMEM175Q9BSA9 504 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 KIFC3Q9BVG8 833 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 CCDC94Q9BW85 323 aaPredicted RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 COLEC11Q9BWP8 271 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 PANK2Q9BZ23 570 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 CCSER1Q9C0I3 900 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 NXF3Q9H4D5 531 aaKnown RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 NRDE2Q9H7Z3 1164 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 NGRNQ9NPE2 291 aaKnown RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 SNTG2Q9NY99 539 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 FAM13BQ9NYF5 915 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 STK17AQ9UEE5 414 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 STK39Q9UEW8 545 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 FBXO2Q9UK22 296 aaPredicted RBP6.48□□□□□ -1.37
CCDC65-204ENST00000552188 ODF2LQ9ULJ1 636 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 PCDHGC3Q9UN70 934 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 LZTS1Q9Y250 596 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 SLC27A5Q9Y2P5 690 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 GDAQ9Y2T3 454 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 HES2Q9Y543 173 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 ATP6V1DQ9Y5K8 247 aa6.48□□□□□ -1.37
CCDC65-204ENST00000552188 LAMA2P24043 3122 aaKnown RBP6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ARL5CA6NH57 179 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 K7ENM7 598 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms